N-methyl-D-aspartate (NMDA) receptor function can be regulated by direct binding of calmodulin to a low and high affinity (C1 exon cassette) site in the C-terminal region of the NR1 subunit. To evaluate the involvement of the high affinity binding site in the transient inactivation of the NMDA receptor-channels by intracellular calcium, several splice variants of the NR1 subunit have been individually co-transfected with the NR2A subunit in HEK 293 cells. The transient Ca2+ induced inactivation (40-50%) of the heteromeric receptors was similar whether the NR1 variants contained (NR1-1a, 1b) or lacked (NR1-2a, 2b, 4a, 4b) the C1 exon cassette bearing the high affinity binding site for calmodulin. This demonstrates that this site is not involved in the Ca2+ dependent transient inactivation of NMDA receptors.