Ribosome targeting of PKR is mediated by two double-stranded RNA-binding domains and facilitates in vivo phosphorylation of eukaryotic initiation factor-2

J Biol Chem. 1997 May 30;272(22):14434-41. doi: 10.1074/jbc.272.22.14434.

Abstract

Protein kinase PKR is activated in mammalian cells during viral infection, leading to phosphorylation of the alpha subunit of eukaryotic initiation factor-2 (eIF-2alpha) and inhibition of protein synthesis. This antiviral response is thought to be mediated by association of double-stranded RNA (ds-RNA), a by-product of viral replication, with two ds-RNA-binding domains (DRBDs) located in the amino terminus of PKR. Recent studies have observed that expression of mammalian PKR in yeast leads to a slow growth phenotype due to hyperphosphorylation of eIF-2alpha. In this report, we observed that while DRBD sequences are required for PKR to function in the yeast model system, these sequences are not required for in vitro phosphorylation of eIF-2alpha. To explain this apparent contradiction, we proposed that these sequences are required to target the kinase to the translation machinery. Using sucrose gradient sedimentation, we found that wild-type PKR was associated with ribosomes, specifically with 40 S particles. Deletions or residue substitutions in the DRBD sequences blocked kinase interaction with ribosomes. These results indicate that in addition to mediating ds-RNA control of PKR, the DRBD sequences facilitate PKR association with ribosomes. Targeting to ribosomes may enhance in vivo phosphorylation of eIF-2alpha, by providing PKR access to its substrate.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Biological Transport
  • Eukaryotic Initiation Factor-2 / metabolism*
  • Humans
  • Phosphorylation
  • Protein Serine-Threonine Kinases / metabolism*
  • RNA, Double-Stranded / metabolism
  • RNA-Binding Proteins / metabolism
  • Ribosomes / metabolism*
  • Saccharomyces cerevisiae
  • eIF-2 Kinase

Substances

  • Eukaryotic Initiation Factor-2
  • RNA, Double-Stranded
  • RNA-Binding Proteins
  • Protein Serine-Threonine Kinases
  • eIF-2 Kinase