Amino acid sequence, post-translational modifications, binding and labelling of porcine odorant-binding protein

Chem Senses. 1998 Dec;23(6):689-98. doi: 10.1093/chemse/23.6.689.

Abstract

An odorant-binding protein, migrating in SDS-PAGE with an apparent molecular weight of 22 kDa and an isoelectric point of 4.2, has been purified from pig nasal mucosa. Its complete amino acid sequence was determined by a combination of mass spectrometry and Edman degradation procedures. The protein consists of a single polypeptide chain of 157 amino acids, presenting at the N-terminus a pyroglutamic acid residue. The two cysteine residues, occurring in the primary structure at positions 63 and 155, are involved in an intramolecular disulphide bridge. Sequence comparison with other lipocalins revealed a good similarity with bovine odorant-binding protein, the only member of this class which does not contain disulphide bonds and of which the three-dimensional structure recently has been resolved. Nine out of the 1 6 residues lining the binding pocket in bovine OBP are conserved in the porcine protein, suggesting structural similarities in this region of the molecule. The synthesis of a fluorescent photoaffinity labelling agent and of two tin-containing thymol analogues is also described. These compounds together with other ligands were able to bind the protein as revealed by competitive binding experiments.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Anthracenes / chemical synthesis
  • Anthracenes / chemistry
  • Anthracenes / metabolism
  • Azides / chemical synthesis
  • Azides / chemistry
  • Azides / metabolism
  • Binding Sites
  • Fluorescence
  • Ligands
  • Molecular Sequence Data
  • Odorants
  • Photoaffinity Labels / chemical synthesis
  • Photoaffinity Labels / chemistry
  • Photoaffinity Labels / metabolism
  • Protein Processing, Post-Translational*
  • Receptors, Odorant / chemistry*
  • Receptors, Odorant / isolation & purification
  • Receptors, Odorant / metabolism*
  • Sequence Analysis
  • Sequence Homology, Amino Acid
  • Swine

Substances

  • 1-azidoanthracene
  • Anthracenes
  • Azides
  • Ligands
  • Photoaffinity Labels
  • Receptors, Odorant
  • odorant-binding protein