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Rice transposable elements: a survey of 73,000 sequence-tagged-connectors.
Mao L, Wood TC, Yu Y, Budiman MA, Tomkins J, Woo S, Sasinowski M, Presting G, Frisch D, Goff S, Dean RA, Wing RA. Mao L, et al. Among authors: budiman ma. Genome Res. 2000 Jul;10(7):982-90. doi: 10.1101/gr.10.7.982. Genome Res. 2000. PMID: 10899147 Free PMC article.
An integrated physical and genetic map of the rice genome.
Chen M, Presting G, Barbazuk WB, Goicoechea JL, Blackmon B, Fang G, Kim H, Frisch D, Yu Y, Sun S, Higingbottom S, Phimphilai J, Phimphilai D, Thurmond S, Gaudette B, Li P, Liu J, Hatfield J, Main D, Farrar K, Henderson C, Barnett L, Costa R, Williams B, Walser S, Atkins M, Hall C, Budiman MA, Tomkins JP, Luo M, Bancroft I, Salse J, Regad F, Mohapatra T, Singh NK, Tyagi AK, Soderlund C, Dean RA, Wing RA. Chen M, et al. Among authors: budiman ma. Plant Cell. 2002 Mar;14(3):537-45. doi: 10.1105/tpc.010485. Plant Cell. 2002. PMID: 11910002 Free PMC article.
A framework for sequencing the rice genome.
Presting GG, Budiman MA, Wood T, Yu Y, Kim HR, Goicoechea JL, Fang E, Blackman B, Jiang J, Woo SS, Dean RA, Frisch D, Wing RA. Presting GG, et al. Among authors: budiman ma. Novartis Found Symp. 2001;236:13-24; discussion 24-7. doi: 10.1002/9780470515778.ch3. Novartis Found Symp. 2001. PMID: 11387975 Review.
Differential methylation of genes and repeats in land plants.
Rabinowicz PD, Citek R, Budiman MA, Nunberg A, Bedell JA, Lakey N, O'Shaughnessy AL, Nascimento LU, McCombie WR, Martienssen RA. Rabinowicz PD, et al. Among authors: budiman ma. Genome Res. 2005 Oct;15(10):1431-40. doi: 10.1101/gr.4100405. Genome Res. 2005. PMID: 16204196 Free PMC article.
Sorghum genome sequencing by methylation filtration.
Bedell JA, Budiman MA, Nunberg A, Citek RW, Robbins D, Jones J, Flick E, Rholfing T, Fries J, Bradford K, McMenamy J, Smith M, Holeman H, Roe BA, Wiley G, Korf IF, Rabinowicz PD, Lakey N, McCombie WR, Jeddeloh JA, Martienssen RA. Bedell JA, et al. Among authors: budiman ma. PLoS Biol. 2005 Jan;3(1):e13. doi: 10.1371/journal.pbio.0030013. Epub 2005 Jan 4. PLoS Biol. 2005. PMID: 15660154 Free PMC article.
Oil palm genome sequence reveals divergence of interfertile species in Old and New worlds.
Singh R, Ong-Abdullah M, Low ET, Manaf MA, Rosli R, Nookiah R, Ooi LC, Ooi SE, Chan KL, Halim MA, Azizi N, Nagappan J, Bacher B, Lakey N, Smith SW, He D, Hogan M, Budiman MA, Lee EK, DeSalle R, Kudrna D, Goicoechea JL, Wing RA, Wilson RK, Fulton RS, Ordway JM, Martienssen RA, Sambanthamurthi R. Singh R, et al. Among authors: budiman ma. Nature. 2013 Aug 15;500(7462):335-9. doi: 10.1038/nature12309. Epub 2013 Jul 24. Nature. 2013. PMID: 23883927 Free PMC article.
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