Hoffman NG - Search Results

1

Turnover of env variable region 1 and 2 genotypes in subjects with late-stage human immunodeficiency virus type 1 infection.

Kitrinos KM, Hoffman NG, Nelson JA, Swanstrom R. Kitrinos KM, et al. Among authors: hoffman ng. J Virol. 2003 Jun;77(12):6811-22. doi: 10.1128/jvi.77.12.6811-6822.2003. J Virol. 2003. PMID: 12768001 Free PMC article.

2

Variability in the human immunodeficiency virus type 1 gp120 Env protein linked to phenotype-associated changes in the V3 loop.

Hoffman NG, Seillier-Moiseiwitsch F, Ahn J, Walker JM, Swanstrom R. Hoffman NG, et al. J Virol. 2002 Apr;76(8):3852-64. doi: 10.1128/jvi.76.8.3852-3864.2002. J Virol. 2002. PMID: 11907225 Free PMC article.

3

Covariation of amino acid positions in HIV-1 protease.

Hoffman NG, Schiffer CA, Swanstrom R. Hoffman NG, et al. Virology. 2003 Sep 30;314(2):536-48. doi: 10.1016/s0042-6822(03)00484-7. Virology. 2003. PMID: 14554082 Free article.

4

Multiple V1/V2 env variants are frequently present during primary infection with human immunodeficiency virus type 1.

Ritola K, Pilcher CD, Fiscus SA, Hoffman NG, Nelson JA, Kitrinos KM, Hicks CB, Eron JJ Jr, Swanstrom R. Ritola K, et al. Among authors: hoffman ng. J Virol. 2004 Oct;78(20):11208-18. doi: 10.1128/JVI.78.20.11208-11218.2004. J Virol. 2004. PMID: 15452240 Free PMC article.

5

HIV-1 populations in blood and breast milk are similar.

Henderson GJ, Hoffman NG, Ping LH, Fiscus SA, Hoffman IF, Kitrinos KM, Banda T, Martinson FE, Kazembe PN, Chilongozi DA, Cohen MS, Swanstrom R. Henderson GJ, et al. Among authors: hoffman if, hoffman ng. Virology. 2004 Dec 5;330(1):295-303. doi: 10.1016/j.virol.2004.09.004. Virology. 2004. PMID: 15527854 Free article.

6

Subtype-specific conformational differences within the V3 region of subtype B and subtype C human immunodeficiency virus type 1 Env proteins.

Patel MB, Hoffman NG, Swanstrom R. Patel MB, et al. Among authors: hoffman ng. J Virol. 2008 Jan;82(2):903-16. doi: 10.1128/JVI.01444-07. Epub 2007 Nov 14. J Virol. 2008. PMID: 18003735 Free PMC article.

7

Improved success of phenotype prediction of the human immunodeficiency virus type 1 from envelope variable loop 3 sequence using neural networks.

Resch W, Hoffman N, Swanstrom R. Resch W, et al. Virology. 2001 Sep 15;288(1):51-62. doi: 10.1006/viro.2001.1087. Virology. 2001. PMID: 11543657 Free article.

8

Using HIV-1 sequence variability to explore virus biology.

McGrath KM, Hoffman NG, Resch W, Nelson JA, Swanstrom R. McGrath KM, et al. Among authors: hoffman ng. Virus Res. 2001 Aug;76(2):137-60. doi: 10.1016/s0168-1702(01)00271-4. Virus Res. 2001. PMID: 11410314 Review.

9

Compensatory evolution in RNA secondary structures increases substitution rate variation among sites.

Knies JL, Dang KK, Vision TJ, Hoffman NG, Swanstrom R, Burch CL. Knies JL, et al. Among authors: hoffman ng. Mol Biol Evol. 2008 Aug;25(8):1778-87. doi: 10.1093/molbev/msn130. Epub 2008 Jun 4. Mol Biol Evol. 2008. PMID: 18535013 Free PMC article.

10

Clinical and immunological impact of HIV envelope V3 sequence variation after starting initial triple antiretroviral therapy.

Brumme ZL, Dong WW, Yip B, Wynhoven B, Hoffman NG, Swanstrom R, Jensen MA, Mullins JI, Hogg RS, Montaner JS, Harrigan PR. Brumme ZL, et al. Among authors: hoffman ng. AIDS. 2004 Mar 5;18(4):F1-9. doi: 10.1097/00002030-200403050-00001. AIDS. 2004. PMID: 15090786

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