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ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia.
Landt SG, Marinov GK, Kundaje A, Kheradpour P, Pauli F, Batzoglou S, Bernstein BE, Bickel P, Brown JB, Cayting P, Chen Y, DeSalvo G, Epstein C, Fisher-Aylor KI, Euskirchen G, Gerstein M, Gertz J, Hartemink AJ, Hoffman MM, Iyer VR, Jung YL, Karmakar S, Kellis M, Kharchenko PV, Li Q, Liu T, Liu XS, Ma L, Milosavljevic A, Myers RM, Park PJ, Pazin MJ, Perry MD, Raha D, Reddy TE, Rozowsky J, Shoresh N, Sidow A, Slattery M, Stamatoyannopoulos JA, Tolstorukov MY, White KP, Xi S, Farnham PJ, Lieb JD, Wold BJ, Snyder M. Landt SG, et al. Among authors: myers rm. Genome Res. 2012 Sep;22(9):1813-31. doi: 10.1101/gr.136184.111. Genome Res. 2012. PMID: 22955991 Free PMC article.
An abundance of bidirectional promoters in the human genome.
Trinklein ND, Aldred SF, Hartman SJ, Schroeder DI, Otillar RP, Myers RM. Trinklein ND, et al. Among authors: myers rm. Genome Res. 2004 Jan;14(1):62-6. doi: 10.1101/gr.1982804. Genome Res. 2004. PMID: 14707170 Free PMC article.
Quality assessment of the human genome sequence.
Schmutz J, Wheeler J, Grimwood J, Dickson M, Yang J, Caoile C, Bajorek E, Black S, Chan YM, Denys M, Escobar J, Flowers D, Fotopulos D, Garcia C, Gomez M, Gonzales E, Haydu L, Lopez F, Ramirez L, Retterer J, Rodriguez A, Rogers S, Salazar A, Tsai M, Myers RM. Schmutz J, et al. Among authors: myers rm. Nature. 2004 May 27;429(6990):365-8. doi: 10.1038/nature02390. Nature. 2004. PMID: 15164052
Direct isolation and identification of promoters in the human genome.
Kim TH, Barrera LO, Qu C, Van Calcar S, Trinklein ND, Cooper SJ, Luna RM, Glass CK, Rosenfeld MG, Myers RM, Ren B. Kim TH, et al. Among authors: myers rm. Genome Res. 2005 Jun;15(6):830-9. doi: 10.1101/gr.3430605. Epub 2005 May 17. Genome Res. 2005. PMID: 15899964 Free PMC article.
527 results