Subramanian A - Search Results

1

PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes.

Mootha VK, Lindgren CM, Eriksson KF, Subramanian A, Sihag S, Lehar J, Puigserver P, Carlsson E, Ridderstråle M, Laurila E, Houstis N, Daly MJ, Patterson N, Mesirov JP, Golub TR, Tamayo P, Spiegelman B, Lander ES, Hirschhorn JN, Altshuler D, Groop LC. Mootha VK, et al. Among authors: subramanian a. Nat Genet. 2003 Jul;34(3):267-73. doi: 10.1038/ng1180. Nat Genet. 2003. PMID: 12808457

2

An oncogenic KRAS2 expression signature identified by cross-species gene-expression analysis.

Sweet-Cordero A, Mukherjee S, Subramanian A, You H, Roix JJ, Ladd-Acosta C, Mesirov J, Golub TR, Jacks T. Sweet-Cordero A, et al. Among authors: subramanian a. Nat Genet. 2005 Jan;37(1):48-55. doi: 10.1038/ng1490. Epub 2004 Dec 19. Nat Genet. 2005. PMID: 15608639 Free article.

3

An RNA interference model of RPS19 deficiency in Diamond-Blackfan anemia recapitulates defective hematopoiesis and rescue by dexamethasone: identification of dexamethasone-responsive genes by microarray.

Ebert BL, Lee MM, Pretz JL, Subramanian A, Mak R, Golub TR, Sieff CA. Ebert BL, et al. Among authors: subramanian a. Blood. 2005 Jun 15;105(12):4620-6. doi: 10.1182/blood-2004-08-3313. Epub 2005 Mar 8. Blood. 2005. PMID: 15755903 Free PMC article.

4

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.

Subramanian A, Tamayo P, Mootha VK, Mukherjee S, Ebert BL, Gillette MA, Paulovich A, Pomeroy SL, Golub TR, Lander ES, Mesirov JP. Subramanian A, et al. Proc Natl Acad Sci U S A. 2005 Oct 25;102(43):15545-50. doi: 10.1073/pnas.0506580102. Epub 2005 Sep 30. Proc Natl Acad Sci U S A. 2005. PMID: 16199517 Free PMC article.

5

Inactivation of the Snf5 tumor suppressor stimulates cell cycle progression and cooperates with p53 loss in oncogenic transformation.

Isakoff MS, Sansam CG, Tamayo P, Subramanian A, Evans JA, Fillmore CM, Wang X, Biegel JA, Pomeroy SL, Mesirov JP, Roberts CW. Isakoff MS, et al. Among authors: subramanian a. Proc Natl Acad Sci U S A. 2005 Dec 6;102(49):17745-50. doi: 10.1073/pnas.0509014102. Epub 2005 Nov 21. Proc Natl Acad Sci U S A. 2005. PMID: 16301525 Free PMC article.

6

Epstein-Barr-virus-encoded LMP2A induces primary epithelial cell migration and invasion: possible role in nasopharyngeal carcinoma metastasis.

Pegtel DM, Subramanian A, Sheen TS, Tsai CH, Golub TR, Thorley-Lawson DA. Pegtel DM, et al. Among authors: subramanian a. J Virol. 2005 Dec;79(24):15430-42. doi: 10.1128/JVI.79.24.15430-15442.2005. J Virol. 2005. PMID: 16306614 Free PMC article.

7

The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease.

Lamb J, Crawford ED, Peck D, Modell JW, Blat IC, Wrobel MJ, Lerner J, Brunet JP, Subramanian A, Ross KN, Reich M, Hieronymus H, Wei G, Armstrong SA, Haggarty SJ, Clemons PA, Wei R, Carr SA, Lander ES, Golub TR. Lamb J, et al. Among authors: subramanian a. Science. 2006 Sep 29;313(5795):1929-35. doi: 10.1126/science.1132939. Science. 2006. PMID: 17008526

8

IFN-alpha-stimulated genes and Epstein-Barr virus gene expression distinguish WHO type II and III nasopharyngeal carcinomas.

Pegtel DM, Subramanian A, Meritt D, Tsai CH, Sheen TS, Golub TR, Thorley-Lawson DA. Pegtel DM, et al. Among authors: subramanian a. Cancer Res. 2007 Jan 15;67(2):474-81. doi: 10.1158/0008-5472.CAN-06-1882. Cancer Res. 2007. PMID: 17234754

9

GSEA-P: a desktop application for Gene Set Enrichment Analysis.

Subramanian A, Kuehn H, Gould J, Tamayo P, Mesirov JP. Subramanian A, et al. Bioinformatics. 2007 Dec 1;23(23):3251-3. doi: 10.1093/bioinformatics/btm369. Epub 2007 Jul 20. Bioinformatics. 2007. PMID: 17644558

10

Gene expression changes in an animal melanoma model correlate with aggressiveness of human melanoma metastases.

Xu L, Shen SS, Hoshida Y, Subramanian A, Ross K, Brunet JP, Wagner SN, Ramaswamy S, Mesirov JP, Hynes RO. Xu L, et al. Among authors: subramanian a. Mol Cancer Res. 2008 May;6(5):760-9. doi: 10.1158/1541-7786.MCR-07-0344. Mol Cancer Res. 2008. PMID: 18505921 Free PMC article.

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