Hautaniemi S - Search Results

1

A novel strategy for microarray quality control using Bayesian networks.

Hautaniemi S, Edgren H, Vesanen P, Wolf M, Järvinen AK, Yli-Harja O, Astola J, Kallioniemi O, Monni O. Hautaniemi S, et al. Bioinformatics. 2003 Nov 1;19(16):2031-8. doi: 10.1093/bioinformatics/btg275. Bioinformatics. 2003. PMID: 14594707

2

[Gene chip technique and associated bioinformatics].

Monni O, Hautaniemi S, Kallioniemi O. Monni O, et al. Among authors: hautaniemi s. Duodecim. 2002;118(11):1157-66. Duodecim. 2002. PMID: 12239849 Review. Finnish. No abstract available.

3

Impact of DNA amplification on gene expression patterns in breast cancer.

Hyman E, Kauraniemi P, Hautaniemi S, Wolf M, Mousses S, Rozenblum E, Ringnér M, Sauter G, Monni O, Elkahloun A, Kallioniemi OP, Kallioniemi A. Hyman E, et al. Among authors: hautaniemi s. Cancer Res. 2002 Nov 1;62(21):6240-5. Cancer Res. 2002. PMID: 12414653

4

RNAi microarray analysis in cultured mammalian cells.

Mousses S, Caplen NJ, Cornelison R, Weaver D, Basik M, Hautaniemi S, Elkahloun AG, Lotufo RA, Choudary A, Dougherty ER, Suh E, Kallioniemi O. Mousses S, et al. Among authors: hautaniemi s. Genome Res. 2003 Oct;13(10):2341-7. doi: 10.1101/gr.1478703. Genome Res. 2003. PMID: 14525932 Free PMC article.

5

Effects of Herceptin treatment on global gene expression patterns in HER2-amplified and nonamplified breast cancer cell lines.

Kauraniemi P, Hautaniemi S, Autio R, Astola J, Monni O, Elkahloun A, Kallioniemi A. Kauraniemi P, et al. Among authors: hautaniemi s. Oncogene. 2004 Jan 29;23(4):1010-3. doi: 10.1038/sj.onc.1207200. Oncogene. 2004. PMID: 14647448

6

High-resolution analysis of gene copy number alterations in human prostate cancer using CGH on cDNA microarrays: impact of copy number on gene expression.

Wolf M, Mousses S, Hautaniemi S, Karhu R, Huusko P, Allinen M, Elkahloun A, Monni O, Chen Y, Kallioniemi A, Kallioniemi OP. Wolf M, et al. Among authors: hautaniemi s. Neoplasia. 2004 May-Jun;6(3):240-7. doi: 10.1593/neo.3439. Neoplasia. 2004. PMID: 15153336 Free PMC article.

7

Are data from different gene expression microarray platforms comparable?

Järvinen AK, Hautaniemi S, Edgren H, Auvinen P, Saarela J, Kallioniemi OP, Monni O. Järvinen AK, et al. Among authors: hautaniemi s. Genomics. 2004 Jun;83(6):1164-8. doi: 10.1016/j.ygeno.2004.01.004. Genomics. 2004. PMID: 15177569

8

High-resolution genomic and expression profiling reveals 105 putative amplification target genes in pancreatic cancer.

Mahlamäki EH, Kauraniemi P, Monni O, Wolf M, Hautaniemi S, Kallioniemi A. Mahlamäki EH, et al. Among authors: hautaniemi s. Neoplasia. 2004 Sep-Oct;6(5):432-9. doi: 10.1593/neo.04130. Neoplasia. 2004. PMID: 15548351 Free PMC article.

9

Optimized LOWESS normalization parameter selection for DNA microarray data.

Berger JA, Hautaniemi S, Järvinen AK, Edgren H, Mitra SK, Astola J. Berger JA, et al. Among authors: hautaniemi s. BMC Bioinformatics. 2004 Dec 9;5:194. doi: 10.1186/1471-2105-5-194. BMC Bioinformatics. 2004. PMID: 15588297 Free PMC article.

10

CGH-Plotter: MATLAB toolbox for CGH-data analysis.

Autio R, Hautaniemi S, Kauraniemi P, Yli-Harja O, Astola J, Wolf M, Kallioniemi A. Autio R, et al. Among authors: hautaniemi s. Bioinformatics. 2003 Sep 1;19(13):1714-5. doi: 10.1093/bioinformatics/btg230. Bioinformatics. 2003. PMID: 15593402

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