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Small RNA expression and strain specificity in the rat.
Linsen SE, de Wit E, de Bruijn E, Cuppen E. Linsen SE, et al. Among authors: de bruijn e, de wit e. BMC Genomics. 2010 Apr 19;11:249. doi: 10.1186/1471-2164-11-249. BMC Genomics. 2010. PMID: 20403161 Free PMC article.
Quantitative analysis of chromatin interaction changes upon a 4.3 Mb deletion at mouse 4E2.
Zepeda-Mendoza CJ, Mukhopadhyay S, Wong ES, Harder N, Splinter E, de Wit E, Eckersley-Maslin MA, Ried T, Eils R, Rohr K, Mills A, de Laat W, Flicek P, Sengupta AM, Spector DL. Zepeda-Mendoza CJ, et al. Among authors: de laat w, de wit e. BMC Genomics. 2015 Nov 21;16:982. doi: 10.1186/s12864-015-2137-5. BMC Genomics. 2015. PMID: 26589460 Free PMC article.
Limitations and possibilities of small RNA digital gene expression profiling.
Linsen SE, de Wit E, Janssens G, Heater S, Chapman L, Parkin RK, Fritz B, Wyman SK, de Bruijn E, Voest EE, Kuersten S, Tewari M, Cuppen E. Linsen SE, et al. Among authors: de bruijn e, de wit e. Nat Methods. 2009 Jul;6(7):474-6. doi: 10.1038/nmeth0709-474. Nat Methods. 2009. PMID: 19564845 No abstract available.
4C technology: protocols and data analysis.
van de Werken HJ, de Vree PJ, Splinter E, Holwerda SJ, Klous P, de Wit E, de Laat W. van de Werken HJ, et al. Among authors: de vree pj, de laat w, de wit e. Methods Enzymol. 2012;513:89-112. doi: 10.1016/B978-0-12-391938-0.00004-5. Methods Enzymol. 2012. PMID: 22929766
Robust 4C-seq data analysis to screen for regulatory DNA interactions.
van de Werken HJ, Landan G, Holwerda SJ, Hoichman M, Klous P, Chachik R, Splinter E, Valdes-Quezada C, Oz Y, Bouwman BA, Verstegen MJ, de Wit E, Tanay A, de Laat W. van de Werken HJ, et al. Among authors: de laat w, de wit e. Nat Methods. 2012 Oct;9(10):969-72. doi: 10.1038/nmeth.2173. Epub 2012 Sep 9. Nat Methods. 2012. PMID: 22961246
313 results