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TORQUE: topology-free querying of protein interaction networks.
Bruckner S, Hüffner F, Karp RM, Shamir R, Sharan R. Bruckner S, et al. Among authors: karp rm. Nucleic Acids Res. 2009 Jul;37(Web Server issue):W106-8. doi: 10.1093/nar/gkp474. Epub 2009 Jun 2. Nucleic Acids Res. 2009. PMID: 19491310 Free PMC article.
Topology-free querying of protein interaction networks.
Bruckner S, Hüffner F, Karp RM, Shamir R, Sharan R. Bruckner S, et al. Among authors: karp rm. J Comput Biol. 2010 Mar;17(3):237-52. doi: 10.1089/cmb.2009.0170. J Comput Biol. 2010. PMID: 20377443
Reconstructing Boolean models of signaling.
Sharan R, Karp RM. Sharan R, et al. Among authors: karp rm. J Comput Biol. 2013 Mar;20(3):249-57. doi: 10.1089/cmb.2012.0241. Epub 2013 Jan 3. J Comput Biol. 2013. PMID: 23286509 Free PMC article.
Conserved patterns of protein interaction in multiple species.
Sharan R, Suthram S, Kelley RM, Kuhn T, McCuine S, Uetz P, Sittler T, Karp RM, Ideker T. Sharan R, et al. Among authors: karp rm. Proc Natl Acad Sci U S A. 2005 Feb 8;102(6):1974-9. doi: 10.1073/pnas.0409522102. Epub 2005 Feb 1. Proc Natl Acad Sci U S A. 2005. PMID: 15687504 Free PMC article.
Algorithms for optical mapping.
Karp RM, Shamir R. Karp RM, et al. J Comput Biol. 2000 Feb-Apr;7(1-2):303-16. doi: 10.1089/10665270050081540. J Comput Biol. 2000. PMID: 10890404
Reconstructing chain functions in genetic networks.
Gat-Viks I, Shamir R, Karp RM, Sharan R. Gat-Viks I, et al. Among authors: karp rm. Pac Symp Biocomput. 2004:498-509. doi: 10.1142/9789812704856_0047. Pac Symp Biocomput. 2004. PMID: 14992528 Free article.
47 results