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Metagenomics to paleogenomics: large-scale sequencing of mammoth DNA.
Poinar HN, Schwarz C, Qi J, Shapiro B, Macphee RD, Buigues B, Tikhonov A, Huson DH, Tomsho LP, Auch A, Rampp M, Miller W, Schuster SC. Poinar HN, et al. Among authors: shapiro b. Science. 2006 Jan 20;311(5759):392-4. doi: 10.1126/science.1123360. Epub 2005 Dec 20. Science. 2006. PMID: 16368896
Comment on "Protein sequences from mastodon and Tyrannosaurus rex revealed by mass spectrometry".
Buckley M, Walker A, Ho SY, Yang Y, Smith C, Ashton P, Oates JT, Cappellini E, Koon H, Penkman K, Elsworth B, Ashford D, Solazzo C, Andrews P, Strahler J, Shapiro B, Ostrom P, Gandhi H, Miller W, Raney B, Zylber MI, Gilbert MT, Prigodich RV, Ryan M, Rijsdijk KF, Janoo A, Collins MJ. Buckley M, et al. Among authors: shapiro b. Science. 2008 Jan 4;319(5859):33; author reply 33. doi: 10.1126/science.1147046. Science. 2008. PMID: 18174420 Free PMC article.
Ancient DNA analyses exclude humans as the driving force behind late Pleistocene musk ox (Ovibos moschatus) population dynamics.
Campos PF, Willerslev E, Sher A, Orlando L, Axelsson E, Tikhonov A, Aaris-Sørensen K, Greenwood AD, Kahlke RD, Kosintsev P, Krakhmalnaya T, Kuznetsova T, Lemey P, MacPhee R, Norris CA, Shepherd K, Suchard MA, Zazula GD, Shapiro B, Gilbert MT. Campos PF, et al. Among authors: shapiro b. Proc Natl Acad Sci U S A. 2010 Mar 23;107(12):5675-80. doi: 10.1073/pnas.0907189107. Epub 2010 Mar 8. Proc Natl Acad Sci U S A. 2010. PMID: 20212118 Free PMC article.
Fossil and genomic evidence constrains the timing of bison arrival in North America.
Froese D, Stiller M, Heintzman PD, Reyes AV, Zazula GD, Soares AE, Meyer M, Hall E, Jensen BJ, Arnold LJ, MacPhee RD, Shapiro B. Froese D, et al. Among authors: shapiro b. Proc Natl Acad Sci U S A. 2017 Mar 28;114(13):3457-3462. doi: 10.1073/pnas.1620754114. Epub 2017 Mar 13. Proc Natl Acad Sci U S A. 2017. PMID: 28289222 Free PMC article.
The evolutionary and phylogeographic history of woolly mammoths: a comprehensive mitogenomic analysis.
Chang D, Knapp M, Enk J, Lippold S, Kircher M, Lister A, MacPhee RD, Widga C, Czechowski P, Sommer R, Hodges E, Stümpel N, Barnes I, Dalén L, Derevianko A, Germonpré M, Hillebrand-Voiculescu A, Constantin S, Kuznetsova T, Mol D, Rathgeber T, Rosendahl W, Tikhonov AN, Willerslev E, Hannon G, Lalueza-Fox C, Joger U, Poinar H, Hofreiter M, Shapiro B. Chang D, et al. Among authors: shapiro b. Sci Rep. 2017 Mar 22;7:44585. doi: 10.1038/srep44585. Sci Rep. 2017. PMID: 28327635 Free PMC article.
Environmental genomics of Late Pleistocene black bears and giant short-faced bears.
Pedersen MW, De Sanctis B, Saremi NF, Sikora M, Puckett EE, Gu Z, Moon KL, Kapp JD, Vinner L, Vardanyan Z, Ardelean CF, Arroyo-Cabrales J, Cahill JA, Heintzman PD, Zazula G, MacPhee RDE, Shapiro B, Durbin R, Willerslev E. Pedersen MW, et al. Among authors: shapiro b. Curr Biol. 2021 Jun 21;31(12):2728-2736.e8. doi: 10.1016/j.cub.2021.04.027. Epub 2021 Apr 19. Curr Biol. 2021. PMID: 33878301 Free article.
Deep-time paleogenomics and the limits of DNA survival.
Dalén L, Heintzman PD, Kapp JD, Shapiro B. Dalén L, et al. Among authors: shapiro b. Science. 2023 Oct 6;382(6666):48-53. doi: 10.1126/science.adh7943. Epub 2023 Oct 5. Science. 2023. PMID: 37797036 Free PMC article. Review.
1,919 results