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Pfam: clans, web tools and services.
Finn RD, Mistry J, Schuster-Böckler B, Griffiths-Jones S, Hollich V, Lassmann T, Moxon S, Marshall M, Khanna A, Durbin R, Eddy SR, Sonnhammer EL, Bateman A. Finn RD, et al. Among authors: hollich v. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D247-51. doi: 10.1093/nar/gkj149. Nucleic Acids Res. 2006. PMID: 16381856 Free PMC article.
The Pfam protein families database.
Bateman A, Coin L, Durbin R, Finn RD, Hollich V, Griffiths-Jones S, Khanna A, Marshall M, Moxon S, Sonnhammer EL, Studholme DJ, Yeats C, Eddy SR. Bateman A, et al. Among authors: hollich v. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D138-41. doi: 10.1093/nar/gkh121. Nucleic Acids Res. 2004. PMID: 14681378 Free PMC article.
PfamAlyzer: domain-centric homology search.
Hollich V, Sonnhammer EL. Hollich V, et al. Bioinformatics. 2007 Dec 15;23(24):3382-3. doi: 10.1093/bioinformatics/btm521. Epub 2007 Oct 31. Bioinformatics. 2007. PMID: 17977882
Domain tree-based analysis of protein architecture evolution.
Forslund K, Henricson A, Hollich V, Sonnhammer EL. Forslund K, et al. Among authors: hollich v. Mol Biol Evol. 2008 Feb;25(2):254-64. doi: 10.1093/molbev/msm254. Epub 2007 Nov 19. Mol Biol Evol. 2008. PMID: 18025066