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The DNA sequence, annotation and analysis of human chromosome 3.
Muzny DM, Scherer SE, Kaul R, Wang J, Yu J, Sudbrak R, Buhay CJ, Chen R, Cree A, Ding Y, Dugan-Rocha S, Gill R, Gunaratne P, Harris RA, Hawes AC, Hernandez J, Hodgson AV, Hume J, Jackson A, Khan ZM, Kovar-Smith C, Lewis LR, Lozado RJ, Metzker ML, Milosavljevic A, Miner GR, Morgan MB, Nazareth LV, Scott G, Sodergren E, Song XZ, Steffen D, Wei S, Wheeler DA, Wright MW, Worley KC, Yuan Y, Zhang Z, Adams CQ, Ansari-Lari MA, Ayele M, Brown MJ, Chen G, Chen Z, Clendenning J, Clerc-Blankenburg KP, Chen R, Chen Z, Davis C, Delgado O, Dinh HH, Dong W, Draper H, Ernst S, Fu G, Gonzalez-Garay ML, Garcia DK, Gillett W, Gu J, Hao B, Haugen E, Havlak P, He X, Hennig S, Hu S, Huang W, Jackson LR, Jacob LS, Kelly SH, Kube M, Levy R, Li Z, Liu B, Liu J, Liu W, Lu J, Maheshwari M, Nguyen BV, Okwuonu GO, Palmeiri A, Pasternak S, Perez LM, Phelps KA, Plopper FJ, Qiang B, Raymond C, Rodriguez R, Saenphimmachak C, Santibanez J, Shen H, Shen Y, Subramanian S, Tabor PE, Verduzco D, Waldron L, Wang J, Wang J, Wang Q, Williams GA, Wong GK, Yao Z, Zhang J, Zhang X, Zhao G, Zhou J, Zhou Y, Nelson D, Lehrach H, Reinhardt R, Naylor SL, Yang H, Olson M, Weinstock G, Gibbs RA. Muzny DM, et al. Among authors: yu j. Nature. 2006 Apr 27;440(7088):1194-8. doi: 10.1038/nature04728. Nature. 2006. PMID: 16641997 Free article.
Initial sequencing and analysis of the human genome.
Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J, Devon K, Dewar K, Doyle M, FitzHugh W, Funke R, Gage D, Harris K, Heaford A, Howland J, Kann L, Lehoczky J, LeVine R, McEwan P, McKernan K, Meldrim J, Mesirov JP, Miranda C, Morris W, Naylor J, Raymond C, Rosetti M, Santos R, Sheridan A, Sougnez C, Stange-Thomann Y, Stojanovic N, Subramanian A, Wyman D, Rogers J, Sulston J, Ainscough R, Beck S, Bentley D, Burton J, Clee C, Carter N, Coulson A, Deadman R, Deloukas P, Dunham A, Dunham I, Durbin R, French L, Grafham D, Gregory S, Hubbard T, Humphray S, Hunt A, Jones M, Lloyd C, McMurray A, Matthews L, Mercer S, Milne S, Mullikin JC, Mungall A, Plumb R, Ross M, Shownkeen R, Sims S, Waterston RH, Wilson RK, Hillier LW, McPherson JD, Marra MA, Mardis ER, Fulton LA, Chinwalla AT, Pepin KH, Gish WR, Chissoe SL, Wendl MC, Delehaunty KD, Miner TL, Delehaunty A, Kramer JB, Cook LL, Fulton RS, Johnson DL, Minx PJ, Clifton SW, Hawkins T, Branscomb E, Predki P, Richardson P, Wenning S, Slezak T, Doggett N, Cheng JF, Olsen A, Lucas S, Elkin C, Uberbacher E, Frazier M, Gibbs RA, Muzny DM, Scherer SE, Bouck JB, Sodergren EJ, Worley KC, Rives CM, Gorrell JH, Metzker ML, Naylor SL, Kuche… See abstract for full author list ➔ Lander ES, et al. Among authors: yu j. Nature. 2001 Feb 15;409(6822):860-921. doi: 10.1038/35057062. Nature. 2001. PMID: 11237011 Free article.
On the nature of human housekeeping genes.
Zhu J, He F, Hu S, Yu J. Zhu J, et al. Among authors: yu j. Trends Genet. 2008 Oct;24(10):481-4. doi: 10.1016/j.tig.2008.08.004. Epub 2008 Sep 9. Trends Genet. 2008. PMID: 18786740
The mappers' torch song.
Yu J, Wong GK. Yu J, et al. Genome Res. 1997 Jul;7(7):666-8. doi: 10.1101/gr.7.7.666. Genome Res. 1997. PMID: 9253595 Free article. Review. No abstract available.
Is "junk" DNA mostly intron DNA?
Wong GK, Passey DA, Huang Y, Yang Z, Yu J. Wong GK, et al. Among authors: yu j. Genome Res. 2000 Nov;10(11):1672-8. doi: 10.1101/gr.148900. Genome Res. 2000. PMID: 11076852 Free PMC article.
Most of the human genome is transcribed.
Wong GK, Passey DA, Yu J. Wong GK, et al. Among authors: yu j. Genome Res. 2001 Dec;11(12):1975-7. doi: 10.1101/gr.202401. Genome Res. 2001. PMID: 11731486 Free article. No abstract available.
The rice mitochondrial genomes and their variations.
Tian X, Zheng J, Hu S, Yu J. Tian X, et al. Among authors: yu j. Plant Physiol. 2006 Feb;140(2):401-10. doi: 10.1104/pp.105.070060. Epub 2005 Dec 29. Plant Physiol. 2006. PMID: 16384910 Free PMC article.
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