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Genome wide profiling of human embryonic stem cells (hESCs), their derivatives and embryonal carcinoma cells to develop base profiles of U.S. Federal government approved hESC lines.
Liu Y, Shin S, Zeng X, Zhan M, Gonzalez R, Mueller FJ, Schwartz CM, Xue H, Li H, Baker SC, Chudin E, Barker DL, McDaniel TK, Oeser S, Loring JF, Mattson MP, Rao MS. Liu Y, et al. Among authors: barker dl. BMC Dev Biol. 2006 May 3;6:20. doi: 10.1186/1471-213X-6-20. BMC Dev Biol. 2006. PMID: 16672070 Free PMC article.
Human embryonic stem cells have a unique epigenetic signature.
Bibikova M, Chudin E, Wu B, Zhou L, Garcia EW, Liu Y, Shin S, Plaia TW, Auerbach JM, Arking DE, Gonzalez R, Crook J, Davidson B, Schulz TC, Robins A, Khanna A, Sartipy P, Hyllner J, Vanguri P, Savant-Bhonsale S, Smith AK, Chakravarti A, Maitra A, Rao M, Barker DL, Loring JF, Fan JB. Bibikova M, et al. Among authors: barker dl. Genome Res. 2006 Sep;16(9):1075-83. doi: 10.1101/gr.5319906. Epub 2006 Aug 9. Genome Res. 2006. PMID: 16899657 Free PMC article.
A model of technical variation of microarray signals.
Chudin E, Kruglyak S, Baker SC, Oeser S, Barker D, McDaniel TK. Chudin E, et al. J Comput Biol. 2006 May;13(4):996-1003. doi: 10.1089/cmb.2006.13.996. J Comput Biol. 2006. PMID: 16761924
High-throughput DNA methylation profiling using universal bead arrays.
Bibikova M, Lin Z, Zhou L, Chudin E, Garcia EW, Wu B, Doucet D, Thomas NJ, Wang Y, Vollmer E, Goldmann T, Seifart C, Jiang W, Barker DL, Chee MS, Floros J, Fan JB. Bibikova M, et al. Among authors: barker dl. Genome Res. 2006 Mar;16(3):383-93. doi: 10.1101/gr.4410706. Epub 2006 Jan 31. Genome Res. 2006. PMID: 16449502 Free PMC article.
Allele-specific expression in the germline of patients with familial pancreatic cancer: an unbiased approach to cancer gene discovery.
Tan AC, Fan JB, Karikari C, Bibikova M, Garcia EW, Zhou L, Barker D, Serre D, Feldmann G, Hruban RH, Klein AP, Goggins M, Couch FJ, Hudson TJ, Winslow RL, Maitra A, Chakravarti A. Tan AC, et al. Cancer Biol Ther. 2008 Jan;7(1):135-44. doi: 10.4161/cbt.7.1.5199. Epub 2007 Oct 19. Cancer Biol Ther. 2008. PMID: 18059179 Free PMC article.
63 results