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On imposing detailed balance in complex reaction mechanisms.
Yang J, Bruno WJ, Hlavacek WS, Pearson JE. Yang J, et al. Among authors: hlavacek ws. Biophys J. 2006 Aug 1;91(3):1136-41. doi: 10.1529/biophysj.105.071852. Epub 2006 May 12. Biophys J. 2006. PMID: 16698778 Free PMC article. No abstract available.
Impacts of vaccination and Severe Acute Respiratory Syndrome Coronavirus 2 variants Alpha and Delta on Coronavirus Disease 2019 transmission dynamics in four metropolitan areas of the United States.
Mallela A, Chen Y, Lin YT, Miller EF, Neumann J, He Z, Nelson KE, Posner RG, Hlavacek WS. Mallela A, et al. Among authors: hlavacek ws. medRxiv [Preprint]. 2024 Jan 8:2021.10.19.21265223. doi: 10.1101/2021.10.19.21265223. medRxiv. 2024. PMID: 34704095 Free PMC article. Updated. Preprint.
'On-the-fly' or 'generate-first' modeling?
Blinov ML, Faeder JR, Yang J, Goldstein B, Hlavacek WS. Blinov ML, et al. Among authors: hlavacek ws. Nat Biotechnol. 2005 Nov;23(11):1344-5; author reply 1345. doi: 10.1038/nbt1105-1344. Nat Biotechnol. 2005. PMID: 16273053 No abstract available.
Depicting signaling cascades.
Blinov ML, Yang J, Faeder JR, Hlavacek WS. Blinov ML, et al. Among authors: hlavacek ws. Nat Biotechnol. 2006 Feb;24(2):137-8; author reply 138. doi: 10.1038/nbt0206-137. Nat Biotechnol. 2006. PMID: 16465147 No abstract available.
Kinetic Monte Carlo method for rule-based modeling of biochemical networks.
Yang J, Monine MI, Faeder JR, Hlavacek WS. Yang J, et al. Among authors: hlavacek ws. Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Sep;78(3 Pt 1):031910. doi: 10.1103/PhysRevE.78.031910. Epub 2008 Sep 10. Phys Rev E Stat Nonlin Soft Matter Phys. 2008. PMID: 18851068 Free PMC article.
115 results