Ye K - Search Results

1

Comparative isoschizomer profiling of cytosine methylation: the HELP assay.

Khulan B, Thompson RF, Ye K, Fazzari MJ, Suzuki M, Stasiek E, Figueroa ME, Glass JL, Chen Q, Montagna C, Hatchwell E, Selzer RR, Richmond TA, Green RD, Melnick A, Greally JM. Khulan B, et al. Among authors: ye k. Genome Res. 2006 Aug;16(8):1046-55. doi: 10.1101/gr.5273806. Epub 2006 Jun 29. Genome Res. 2006. PMID: 16809668 Free PMC article.

2

Transcriptional signature with differential expression of BCL6 target genes accurately identifies BCL6-dependent diffuse large B cell lymphomas.

Polo JM, Juszczynski P, Monti S, Cerchietti L, Ye K, Greally JM, Shipp M, Melnick A. Polo JM, et al. Among authors: ye k. Proc Natl Acad Sci U S A. 2007 Feb 27;104(9):3207-12. doi: 10.1073/pnas.0611399104. Epub 2007 Feb 20. Proc Natl Acad Sci U S A. 2007. PMID: 17360630 Free PMC article.

3

An integrative genomic and epigenomic approach for the study of transcriptional regulation.

Figueroa ME, Reimers M, Thompson RF, Ye K, Li Y, Selzer RR, Fridriksson J, Paietta E, Wiernik P, Green RD, Greally JM, Melnick A. Figueroa ME, et al. Among authors: ye k. PLoS One. 2008 Mar 26;3(3):e1882. doi: 10.1371/journal.pone.0001882. PLoS One. 2008. PMID: 18365023 Free PMC article.

4

Meta-analysis of microarray studies reveals a novel hematopoietic progenitor cell signature and demonstrates feasibility of inter-platform data integration.

Sohal D, Yeatts A, Ye K, Pellagatti A, Zhou L, Pahanish P, Mo Y, Bhagat T, Mariadason J, Boultwood J, Melnick A, Greally J, Verma A. Sohal D, et al. Among authors: ye k. PLoS One. 2008 Aug 13;3(8):e2965. doi: 10.1371/journal.pone.0002965. PLoS One. 2008. PMID: 18698424 Free PMC article.

5

Genome-wide analysis of DNA binding and transcriptional regulation by the mammalian Doublesex homolog DMRT1 in the juvenile testis.

Murphy MW, Sarver AL, Rice D, Hatzi K, Ye K, Melnick A, Heckert LL, Zarkower D, Bardwell VJ. Murphy MW, et al. Among authors: ye k. Proc Natl Acad Sci U S A. 2010 Jul 27;107(30):13360-5. doi: 10.1073/pnas.1006243107. Epub 2010 Jul 7. Proc Natl Acad Sci U S A. 2010. PMID: 20616082 Free PMC article.

6

Detecting, quantifying, and discriminating the mechanism of mosaic chromosomal aneuploidies using MAD-seq.

Kong Y, Berko ER, Marcketta A, Maqbool SB, Simões-Pires CA, Kronn DF, Ye KQ, Suzuki M, Auton A, Greally JM. Kong Y, et al. Genome Res. 2018 Jul;28(7):1039-1052. doi: 10.1101/gr.226282.117. Epub 2018 May 17. Genome Res. 2018. PMID: 29773658 Free PMC article.

7

Genetic Variants Associated with FDNY WTC-Related Sarcoidosis.

Cleven KL, Ye K, Zeig-Owens R, Hena KM, Montagna C, Shan J, Hosgood HD 3rd, Jaber N, Weiden MD, Colbeth HL, Goldfarb DG, Spivack SD, Prezant DJ. Cleven KL, et al. Among authors: ye k. Int J Environ Res Public Health. 2019 May 23;16(10):1830. doi: 10.3390/ijerph16101830. Int J Environ Res Public Health. 2019. PMID: 31126090 Free PMC article.

8

Low molecular weight serum cell-free DNA concentration is associated with clinicopathologic indices of poor prognosis in women with uterine cancer.

Gressel GM, Maggi EC, Harmon BE, Ye KQ, Kuo DYS, Dolan SM, Montagna C. Gressel GM, et al. J Transl Med. 2020 Aug 27;18(1):323. doi: 10.1186/s12967-020-02493-8. J Transl Med. 2020. PMID: 32854748 Free PMC article.

9

Behavioral and Genetic Factors Associated with Successful Long-Term Cessation in Persons with HIV Who Smoke Cigarettes.

Shuter J, Hosgood HD, Kim RS, Ye K, Montagna C, Shan J, Weinberger AH. Shuter J, et al. Among authors: ye k. J Smok Cessat. 2021 Dec 10;2021:1894160. doi: 10.1155/2021/1894160. eCollection 2021. J Smok Cessat. 2021. PMID: 34956404 Free PMC article.

10

The BCL6 transcriptional program features repression of multiple oncogenes in primary B cells and is deregulated in DLBCL.

Ci W, Polo JM, Cerchietti L, Shaknovich R, Wang L, Yang SN, Ye K, Farinha P, Horsman DE, Gascoyne RD, Elemento O, Melnick A. Ci W, et al. Among authors: ye k. Blood. 2009 May 28;113(22):5536-48. doi: 10.1182/blood-2008-12-193037. Epub 2009 Mar 23. Blood. 2009. PMID: 19307668 Free PMC article.

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