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Multipolar consensus for phylogenetic trees.
Bonnard C, Berry V, Lartillot N. Bonnard C, et al. Among authors: berry v. Syst Biol. 2006 Oct;55(5):837-43. doi: 10.1080/10635150600969880. Syst Biol. 2006. PMID: 17060203
PhySIC: a veto supertree method with desirable properties.
Ranwez V, Berry V, Criscuolo A, Fabre PH, Guillemot S, Scornavacca C, Douzery EJ. Ranwez V, et al. Among authors: berry v. Syst Biol. 2007 Oct;56(5):798-817. doi: 10.1080/10635150701639754. Syst Biol. 2007. PMID: 17918032
On the inference of complex phylogenetic networks by Markov Chain Monte-Carlo.
Rabier CE, Berry V, Stoltz M, Santos JD, Wang W, Glaszmann JC, Pardi F, Scornavacca C. Rabier CE, et al. Among authors: berry v. PLoS Comput Biol. 2021 Sep 3;17(9):e1008380. doi: 10.1371/journal.pcbi.1008380. eCollection 2021 Sep. PLoS Comput Biol. 2021. PMID: 34478440 Free PMC article.
RecPhyloXML: a format for reconciled gene trees.
Duchemin W, Gence G, Arigon Chifolleau AM, Arvestad L, Bansal MS, Berry V, Boussau B, Chevenet F, Comte N, Davín AA, Dessimoz C, Dylus D, Hasic D, Mallo D, Planel R, Posada D, Scornavacca C, Szöllosi G, Zhang L, Tannier É, Daubin V. Duchemin W, et al. Among authors: berry v. Bioinformatics. 2018 Nov 1;34(21):3646-3652. doi: 10.1093/bioinformatics/bty389. Bioinformatics. 2018. PMID: 29762653 Free PMC article.
224 results