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ProServer: a simple, extensible Perl DAS server.
Finn RD, Stalker JW, Jackson DK, Kulesha E, Clements J, Pettett R. Finn RD, et al. Bioinformatics. 2007 Jun 15;23(12):1568-70. doi: 10.1093/bioinformatics/btl650. Epub 2007 Jan 18. Bioinformatics. 2007. PMID: 17237073 Free PMC article.
The Pfam protein families database.
Bateman A, Coin L, Durbin R, Finn RD, Hollich V, Griffiths-Jones S, Khanna A, Marshall M, Moxon S, Sonnhammer EL, Studholme DJ, Yeats C, Eddy SR. Bateman A, et al. Among authors: finn rd. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D138-41. doi: 10.1093/nar/gkh121. Nucleic Acids Res. 2004. PMID: 14681378 Free PMC article.
Pfam: clans, web tools and services.
Finn RD, Mistry J, Schuster-Böckler B, Griffiths-Jones S, Hollich V, Lassmann T, Moxon S, Marshall M, Khanna A, Durbin R, Eddy SR, Sonnhammer EL, Bateman A. Finn RD, et al. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D247-51. doi: 10.1093/nar/gkj149. Nucleic Acids Res. 2006. PMID: 16381856 Free PMC article.
Integrating sequence and structural biology with DAS.
Prlić A, Down TA, Kulesha E, Finn RD, Kähäri A, Hubbard TJ. Prlić A, et al. Among authors: finn rd. BMC Bioinformatics. 2007 Sep 12;8:333. doi: 10.1186/1471-2105-8-333. BMC Bioinformatics. 2007. PMID: 17850653 Free PMC article.
The Pfam protein families database.
Finn RD, Tate J, Mistry J, Coggill PC, Sammut SJ, Hotz HR, Ceric G, Forslund K, Eddy SR, Sonnhammer EL, Bateman A. Finn RD, et al. Nucleic Acids Res. 2008 Jan;36(Database issue):D281-8. doi: 10.1093/nar/gkm960. Epub 2007 Nov 26. Nucleic Acids Res. 2008. PMID: 18039703 Free PMC article.
Integrating biological data--the Distributed Annotation System.
Jenkinson AM, Albrecht M, Birney E, Blankenburg H, Down T, Finn RD, Hermjakob H, Hubbard TJ, Jimenez RC, Jones P, Kähäri A, Kulesha E, Macías JR, Reeves GA, Prlić A. Jenkinson AM, et al. Among authors: finn rd. BMC Bioinformatics. 2008 Jul 22;9 Suppl 8(Suppl 8):S3. doi: 10.1186/1471-2105-9-S8-S3. BMC Bioinformatics. 2008. PMID: 18673527 Free PMC article.
Identifying protein domains with the Pfam database.
Coggill P, Finn RD, Bateman A. Coggill P, et al. Among authors: finn rd. Curr Protoc Bioinformatics. 2008 Sep;Chapter 2:2.5.1-2.5.17. doi: 10.1002/0471250953.bi0205s23. Curr Protoc Bioinformatics. 2008. PMID: 18819075
261 results