Davis S - Search Results

1

GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor.

Davis S, Meltzer PS. Davis S, et al. Bioinformatics. 2007 Jul 15;23(14):1846-7. doi: 10.1093/bioinformatics/btm254. Epub 2007 May 12. Bioinformatics. 2007. PMID: 17496320

2

GEOmetadb: powerful alternative search engine for the Gene Expression Omnibus.

Zhu Y, Davis S, Stephens R, Meltzer PS, Chen Y. Zhu Y, et al. Among authors: davis s. Bioinformatics. 2008 Dec 1;24(23):2798-800. doi: 10.1093/bioinformatics/btn520. Epub 2008 Oct 7. Bioinformatics. 2008. PMID: 18842599 Free PMC article.

3

RCircos: an R package for Circos 2D track plots.

Zhang H, Meltzer P, Davis S. Zhang H, et al. Among authors: davis s. BMC Bioinformatics. 2013 Aug 10;14:244. doi: 10.1186/1471-2105-14-244. BMC Bioinformatics. 2013. PMID: 23937229 Free PMC article.

4

Modeling synovial sarcoma: timing is everything.

Davis SR, Meltzer PS. Davis SR, et al. Cancer Cell. 2007 Apr;11(4):305-7. doi: 10.1016/j.ccr.2007.03.016. Cancer Cell. 2007. PMID: 17418406 Free article.

5

Interaction of the glucocorticoid receptor with the chromatin landscape.

John S, Sabo PJ, Johnson TA, Sung MH, Biddie SC, Lightman SL, Voss TC, Davis SR, Meltzer PS, Stamatoyannopoulos JA, Hager GL. John S, et al. Among authors: davis sr. Mol Cell. 2008 Mar 14;29(5):611-24. doi: 10.1016/j.molcel.2008.02.010. Mol Cell. 2008. PMID: 18342607 Free article.

6

SRAdb: query and use public next-generation sequencing data from within R.

Zhu Y, Stephens RM, Meltzer PS, Davis SR. Zhu Y, et al. Among authors: davis sr. BMC Bioinformatics. 2013 Jan 17;14:19. doi: 10.1186/1471-2105-14-19. BMC Bioinformatics. 2013. PMID: 23323543 Free PMC article.

7

NCI-60 whole exome sequencing and pharmacological CellMiner analyses.

Reinhold WC, Varma S, Sousa F, Sunshine M, Abaan OD, Davis SR, Reinhold SW, Kohn KW, Morris J, Meltzer PS, Doroshow JH, Pommier Y. Reinhold WC, et al. Among authors: davis sr. PLoS One. 2014 Jul 17;9(7):e101670. doi: 10.1371/journal.pone.0101670. eCollection 2014. PLoS One. 2014. PMID: 25032700 Free PMC article.

8

caOmicsV: an R package for visualizing multidimensional cancer genomic data.

Zhang H, Meltzer PS, Davis SR. Zhang H, et al. Among authors: davis sr. BMC Bioinformatics. 2016 Mar 22;17:141. doi: 10.1186/s12859-016-0989-6. BMC Bioinformatics. 2016. PMID: 27005934 Free PMC article.

9

Gene expression profiling of human sarcomas: insights into sarcoma biology.

Baird K, Davis S, Antonescu CR, Harper UL, Walker RL, Chen Y, Glatfelter AA, Duray PH, Meltzer PS. Baird K, et al. Among authors: davis s. Cancer Res. 2005 Oct 15;65(20):9226-35. doi: 10.1158/0008-5472.CAN-05-1699. Cancer Res. 2005. PMID: 16230383

10

Genome-wide analysis of menin binding provides insights into MEN1 tumorigenesis.

Scacheri PC, Davis S, Odom DT, Crawford GE, Perkins S, Halawi MJ, Agarwal SK, Marx SJ, Spiegel AM, Meltzer PS, Collins FS. Scacheri PC, et al. Among authors: davis s. PLoS Genet. 2006 Apr;2(4):e51. doi: 10.1371/journal.pgen.0020051. Epub 2006 Apr 7. PLoS Genet. 2006. PMID: 16604156 Free PMC article.

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