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A collection of 10,096 indica rice full-length cDNAs reveals highly expressed sequence divergence between Oryza sativa indica and japonica subspecies.
Liu X, Lu T, Yu S, Li Y, Huang Y, Huang T, Zhang L, Zhu J, Zhao Q, Fan D, Mu J, Shangguan Y, Feng Q, Guan J, Ying K, Zhang Y, Lin Z, Sun Z, Qian Q, Lu Y, Han B. Liu X, et al. Among authors: zhang l, zhang y. Plant Mol Biol. 2007 Nov;65(4):403-15. doi: 10.1007/s11103-007-9174-7. Epub 2007 May 24. Plant Mol Biol. 2007. PMID: 17522955
Sequence and analysis of rice chromosome 4.
Feng Q, Zhang Y, Hao P, Wang S, Fu G, Huang Y, Li Y, Zhu J, Liu Y, Hu X, Jia P, Zhang Y, Zhao Q, Ying K, Yu S, Tang Y, Weng Q, Zhang L, Lu Y, Mu J, Lu Y, Zhang LS, Yu Z, Fan D, Liu X, Lu T, Li C, Wu Y, Sun T, Lei H, Li T, Hu H, Guan J, Wu M, Zhang R, Zhou B, Chen Z, Chen L, Jin Z, Wang R, Yin H, Cai Z, Ren S, Lv G, Gu W, Zhu G, Tu Y, Jia J, Zhang Y, Chen J, Kang H, Chen X, Shao C, Sun Y, Hu Q, Zhang X, Zhang W, Wang L, Ding C, Sheng H, Gu J, Chen S, Ni L, Zhu F, Chen W, Lan L, Lai Y, Cheng Z, Gu M, Jiang J, Li J, Hong G, Xue Y, Han B. Feng Q, et al. Among authors: zhang ls, zhang l, zhang r, zhang w, zhang x, zhang y. Nature. 2002 Nov 21;420(6913):316-20. doi: 10.1038/nature01183. Nature. 2002. PMID: 12447439
A fine physical map of the rice chromosome 4.
Zhao Q, Zhang Y, Cheng Z, Chen M, Wang S, Feng Q, Huang Y, Li Y, Tang Y, Zhou B, Chen Z, Yu S, Zhu J, Hu X, Mu J, Ying K, Hao P, Zhang L, Lu Y, Zhang LS, Liu Y, Yu Z, Fan D, Weng Q, Chen L, Lu T, Liu X, Jia P, Sun T, Wu Y, Zhang Y, Lu Y, Li C, Wang R, Lei H, Li T, Hu H, Wu M, Zhang R, Guan J, Zhu J, Fu G, Gu M, Hong G, Xue Y, Wing R, Jiang J, Han B. Zhao Q, et al. Among authors: zhang ls, zhang l, zhang r, zhang y. Genome Res. 2002 May;12(5):817-23. doi: 10.1101/gr.48902. Genome Res. 2002. PMID: 11997348 Free PMC article.
Structural features of the rice chromosome 4 centromere.
Zhang Y, Huang Y, Zhang L, Li Y, Lu T, Lu Y, Feng Q, Zhao Q, Cheng Z, Xue Y, Wing RA, Han B. Zhang Y, et al. Among authors: zhang l. Nucleic Acids Res. 2004 Apr 2;32(6):2023-30. doi: 10.1093/nar/gkh521. Print 2004. Nucleic Acids Res. 2004. PMID: 15064362 Free PMC article.
A map of rice genome variation reveals the origin of cultivated rice.
Huang X, Kurata N, Wei X, Wang ZX, Wang A, Zhao Q, Zhao Y, Liu K, Lu H, Li W, Guo Y, Lu Y, Zhou C, Fan D, Weng Q, Zhu C, Huang T, Zhang L, Wang Y, Feng L, Furuumi H, Kubo T, Miyabayashi T, Yuan X, Xu Q, Dong G, Zhan Q, Li C, Fujiyama A, Toyoda A, Lu T, Feng Q, Qian Q, Li J, Han B. Huang X, et al. Among authors: zhang l. Nature. 2012 Oct 25;490(7421):497-501. doi: 10.1038/nature11532. Epub 2012 Oct 3. Nature. 2012. PMID: 23034647 Free PMC article.
Pan-genome analysis highlights the extent of genomic variation in cultivated and wild rice.
Zhao Q, Feng Q, Lu H, Li Y, Wang A, Tian Q, Zhan Q, Lu Y, Zhang L, Huang T, Wang Y, Fan D, Zhao Y, Wang Z, Zhou C, Chen J, Zhu C, Li W, Weng Q, Xu Q, Wang ZX, Wei X, Han B, Huang X. Zhao Q, et al. Among authors: zhang l. Nat Genet. 2018 Feb;50(2):278-284. doi: 10.1038/s41588-018-0041-z. Epub 2018 Jan 15. Nat Genet. 2018. PMID: 29335547
Genomic architecture of heterosis for yield traits in rice.
Huang X, Yang S, Gong J, Zhao Q, Feng Q, Zhan Q, Zhao Y, Li W, Cheng B, Xia J, Chen N, Huang T, Zhang L, Fan D, Chen J, Zhou C, Lu Y, Weng Q, Han B. Huang X, et al. Among authors: zhang l. Nature. 2016 Sep 29;537(7622):629-633. doi: 10.1038/nature19760. Epub 2016 Sep 7. Nature. 2016. PMID: 27602511
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