Bustamante CD - Search Results

1

Genome-wide patterns of nucleotide polymorphism in domesticated rice.

Caicedo AL, Williamson SH, Hernandez RD, Boyko A, Fledel-Alon A, York TL, Polato NR, Olsen KM, Nielsen R, McCouch SR, Bustamante CD, Purugganan MD. Caicedo AL, et al. Among authors: bustamante cd. PLoS Genet. 2007 Sep;3(9):1745-56. doi: 10.1371/journal.pgen.0030163. Epub 2007 Aug 6. PLoS Genet. 2007. PMID: 17907810 Free PMC article.

2

A maximum likelihood method for analyzing pseudogene evolution: implications for silent site evolution in humans and rodents.

Bustamante CD, Nielsen R, Hartl DL. Bustamante CD, et al. Mol Biol Evol. 2002 Jan;19(1):110-7. doi: 10.1093/oxfordjournals.molbev.a003975. Mol Biol Evol. 2002. PMID: 11752196

3

The cost of inbreeding in Arabidopsis.

Bustamante CD, Nielsen R, Sawyer SA, Olsen KM, Purugganan MD, Hartl DL. Bustamante CD, et al. Nature. 2002 Apr 4;416(6880):531-4. doi: 10.1038/416531a. Nature. 2002. PMID: 11932744

4

Maximum likelihood and Bayesian methods for estimating the distribution of selective effects among classes of mutations using DNA polymorphism data.

Bustamante CD, Nielsen R, Hartl DL. Bustamante CD, et al. Theor Popul Biol. 2003 Mar;63(2):91-103. doi: 10.1016/s0040-5809(02)00050-3. Theor Popul Biol. 2003. PMID: 12615493

5

Selection on rapidly evolving proteins in the Arabidopsis genome.

Barrier M, Bustamante CD, Yu J, Purugganan MD. Barrier M, et al. Among authors: bustamante cd. Genetics. 2003 Feb;163(2):723-33. doi: 10.1093/genetics/163.2.723. Genetics. 2003. PMID: 12618409 Free PMC article.

6

Population genetics of polymorphism and divergence for diploid selection models with arbitrary dominance.

Williamson S, Fledel-Alon A, Bustamante CD. Williamson S, et al. Among authors: bustamante cd. Genetics. 2004 Sep;168(1):463-75. doi: 10.1534/genetics.103.024745. Genetics. 2004. PMID: 15454557 Free PMC article.

7

A statistical characterization of consistent patterns of human immunodeficiency virus evolution within infected patients.

Williamson S, Perry SM, Bustamante CD, Orive ME, Stearns MN, Kelly JK. Williamson S, et al. Among authors: bustamante cd. Mol Biol Evol. 2005 Mar;22(3):456-68. doi: 10.1093/molbev/msi029. Epub 2004 Oct 27. Mol Biol Evol. 2005. PMID: 15509726

8

Darwinian selection on a selfing locus.

Shimizu KK, Cork JM, Caicedo AL, Mays CA, Moore RC, Olsen KM, Ruzsa S, Coop G, Bustamante CD, Awadalla P, Purugganan MD. Shimizu KK, et al. Among authors: bustamante cd. Science. 2004 Dec 17;306(5704):2081-4. doi: 10.1126/science.1103776. Science. 2004. PMID: 15604405 Retracted.

9

Simultaneous inference of selection and population growth from patterns of variation in the human genome.

Williamson SH, Hernandez R, Fledel-Alon A, Zhu L, Nielsen R, Bustamante CD. Williamson SH, et al. Among authors: bustamante cd. Proc Natl Acad Sci U S A. 2005 May 31;102(22):7882-7. doi: 10.1073/pnas.0502300102. Epub 2005 May 19. Proc Natl Acad Sci U S A. 2005. PMID: 15905331 Free PMC article.

10

Distinguishing between selective sweeps and demography using DNA polymorphism data.

Jensen JD, Kim Y, DuMont VB, Aquadro CF, Bustamante CD. Jensen JD, et al. Among authors: bustamante cd. Genetics. 2005 Jul;170(3):1401-10. doi: 10.1534/genetics.104.038224. Epub 2005 May 23. Genetics. 2005. PMID: 15911584 Free PMC article.

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