Roytberg M - Search Results

1

Analysis of sequence conservation at nucleotide resolution.

Asthana S, Roytberg M, Stamatoyannopoulos J, Sunyaev S. Asthana S, et al. Among authors: roytberg m. PLoS Comput Biol. 2007 Dec;3(12):e254. doi: 10.1371/journal.pcbi.0030254. Epub 2007 Nov 14. PLoS Comput Biol. 2007. PMID: 18166073 Free PMC article.

2

From analysis of protein structural alignments toward a novel approach to align protein sequences.

Sunyaev SR, Bogopolsky GA, Oleynikova NV, Vlasov PK, Finkelstein AV, Roytberg MA. Sunyaev SR, et al. Proteins. 2004 Feb 15;54(3):569-82. doi: 10.1002/prot.10503. Proteins. 2004. PMID: 14748004

3

Reconstruction of genuine pair-wise sequence alignment.

Polyanovsky V, Roytberg MA, Tumanyan VG. Polyanovsky V, et al. Among authors: roytberg ma. J Comput Biol. 2008 May;15(4):379-91. doi: 10.1089/cmb.2007.0145. J Comput Biol. 2008. PMID: 18435572

4

Computation of biopolymers: a general approach to different problems.

Finkelstein AV, Roytberg MA. Finkelstein AV, et al. Among authors: roytberg ma. Biosystems. 1993;30(1-3):1-19. doi: 10.1016/0303-2647(93)90058-k. Biosystems. 1993. PMID: 7690608

5

Recognition of genes in human DNA sequences.

Gelfand MS, Podolsky LI, Astakhova TV, Roytberg MA. Gelfand MS, et al. Among authors: roytberg ma. J Comput Biol. 1996 Summer;3(2):223-34. doi: 10.1089/cmb.1996.3.223. J Comput Biol. 1996. PMID: 8811484

6

A hierarchical approach to aligning collinear regions of genomes.

Roytberg MA, Ogurtsov AY, Shabalina SA, Kondrashov AS. Roytberg MA, et al. Bioinformatics. 2002 Dec;18(12):1673-80. doi: 10.1093/bioinformatics/18.12.1673. Bioinformatics. 2002. PMID: 12490453

7

On subset seeds for protein alignment.

Roytberg M, Gambin A, Noé L, Lasota S, Furletova E, Szczurek E, Kucherov G. Roytberg M, et al. IEEE/ACM Trans Comput Biol Bioinform. 2009 Jul-Sep;6(3):483-94. doi: 10.1109/TCBB.2009.4. IEEE/ACM Trans Comput Biol Bioinform. 2009. PMID: 19644175 Free article.

8

Performance-guarantee gene predictions via spliced alignment.

Mironov AA, Roytberg MA, Pevzner PA, Gelfand MS. Mironov AA, et al. Among authors: roytberg ma. Genomics. 1998 Aug 1;51(3):332-9. doi: 10.1006/geno.1998.5251. Genomics. 1998. PMID: 9721203

9

A search for common patterns in many sequences.

Roytberg MA. Roytberg MA. Comput Appl Biosci. 1992 Feb;8(1):57-64. doi: 10.1093/bioinformatics/8.1.57. Comput Appl Biosci. 1992. PMID: 1568127

10

SAMSON: a software package for the biopolymer primary structure analysis.

Nazipova NN, Shabalina SA, Ogurtsov AYu, Kondrashov AS, Roytberg MA, Buryakov GV, Vernoslov SE. Nazipova NN, et al. Among authors: roytberg ma. Comput Appl Biosci. 1995 Aug;11(4):423-6. doi: 10.1093/bioinformatics/11.4.423. Comput Appl Biosci. 1995. PMID: 8521051

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