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Full-length messenger RNA sequences greatly improve genome annotation.
Haas BJ, Volfovsky N, Town CD, Troukhan M, Alexandrov N, Feldmann KA, Flavell RB, White O, Salzberg SL. Haas BJ, et al. Among authors: white o. Genome Biol. 2002;3(6):RESEARCH0029. doi: 10.1186/gb-2002-3-6-research0029. Epub 2002 May 30. Genome Biol. 2002. PMID: 12093376 Free PMC article.
Annotation of the Arabidopsis genome.
Wortman JR, Haas BJ, Hannick LI, Smith RK Jr, Maiti R, Ronning CM, Chan AP, Yu C, Ayele M, Whitelaw CA, White OR, Town CD. Wortman JR, et al. Plant Physiol. 2003 Jun;132(2):461-8. doi: 10.1104/pp.103.022251. Plant Physiol. 2003. PMID: 12805579 Free PMC article. No abstract available.
Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species.
Buell CR, Yuan Q, Ouyang S, Liu J, Zhu W, Wang A, Maiti R, Haas B, Wortman J, Pertea M, Jones KM, Kim M, Overton L, Tsitrin T, Fadrosh D, Bera J, Weaver B, Jin S, Johri S, Reardon M, Webb K, Hill J, Moffat K, Tallon L, Van Aken S, Lewis M, Utterback T, Feldblyum T, Zismann V, Iobst S, Hsiao J, de Vazeille AR, Salzberg SL, White O, Fraser C, Yu Y, Kim H, Rambo T, Currie J, Collura K, Kernodle-Thompson S, Wei F, Kudrna K, Ammiraju JS, Luo M, Goicoechea JL, Wing RA, Henry D, Oates R, Palmer M, Pries G, Saski C, Simmons J, Soderlund C, Nelson W, de la Bastide M, Spiegel L, Nascimento L, Huang E, Preston R, Zutavern T, Palmer L, O'Shaughnessy A, Dike S, McCombie WR, Minx P, Cordum H, Wilson R, Jin W, Lee HR, Jiang J, Jackson S; Rice Chromosome 3 Sequencing Consortium. Buell CR, et al. Among authors: white o, o shaughnessy a. Genome Res. 2005 Sep;15(9):1284-91. doi: 10.1101/gr.3869505. Epub 2005 Aug 18. Genome Res. 2005. PMID: 16109971 Free PMC article.
Prediction of operons in microbial genomes.
Ermolaeva MD, White O, Salzberg SL. Ermolaeva MD, et al. Among authors: white o. Nucleic Acids Res. 2001 Mar 1;29(5):1216-21. doi: 10.1093/nar/29.5.1216. Nucleic Acids Res. 2001. PMID: 11222772 Free PMC article.
437 results