Rebholz-Schuhmann D - Search Results

1

Facilitating the development of controlled vocabularies for metabolomics technologies with text mining.

Spasić I, Schober D, Sansone SA, Rebholz-Schuhmann D, Kell DB, Paton NW. Spasić I, et al. BMC Bioinformatics. 2008 Apr 29;9 Suppl 5(Suppl 5):S5. doi: 10.1186/1471-2105-9-S5-S5. BMC Bioinformatics. 2008. PMID: 18460187 Free PMC article.

2

The BioLexicon: a large-scale terminological resource for biomedical text mining.

Thompson P, McNaught J, Montemagni S, Calzolari N, del Gratta R, Lee V, Marchi S, Monachini M, Pezik P, Quochi V, Rupp CJ, Sasaki Y, Venturi G, Rebholz-Schuhmann D, Ananiadou S. Thompson P, et al. BMC Bioinformatics. 2011 Oct 12;12:397. doi: 10.1186/1471-2105-12-397. BMC Bioinformatics. 2011. PMID: 21992002 Free PMC article.

3

Assessment of disease named entity recognition on a corpus of annotated sentences.

Jimeno A, Jimenez-Ruiz E, Lee V, Gaudan S, Berlanga R, Rebholz-Schuhmann D. Jimeno A, et al. BMC Bioinformatics. 2008 Apr 11;9 Suppl 3(Suppl 3):S3. doi: 10.1186/1471-2105-9-S3-S3. BMC Bioinformatics. 2008. PMID: 18426548 Free PMC article.

4

Annotation of protein residues based on a literature analysis: cross-validation against UniProtKb.

Nagel K, Jimeno-Yepes A, Rebholz-Schuhmann D. Nagel K, et al. BMC Bioinformatics. 2009 Aug 27;10 Suppl 8(Suppl 8):S4. doi: 10.1186/1471-2105-10-S8-S4. BMC Bioinformatics. 2009. PMID: 19758468 Free PMC article.

5

Text processing through Web services: calling Whatizit.

Rebholz-Schuhmann D, Arregui M, Gaudan S, Kirsch H, Jimeno A. Rebholz-Schuhmann D, et al. Bioinformatics. 2008 Jan 15;24(2):296-8. doi: 10.1093/bioinformatics/btm557. Epub 2007 Nov 15. Bioinformatics. 2008. PMID: 18006544

6

Reuse of terminological resources for efficient ontological engineering in Life Sciences.

Jimeno-Yepes A, Jiménez-Ruiz E, Berlanga-Llavori R, Rebholz-Schuhmann D. Jimeno-Yepes A, et al. BMC Bioinformatics. 2009 Oct 1;10 Suppl 10(Suppl 10):S4. doi: 10.1186/1471-2105-10-S10-S4. BMC Bioinformatics. 2009. PMID: 19796401 Free PMC article.

7

Relations as patterns: bridging the gap between OBO and OWL.

Hoehndorf R, Oellrich A, Dumontier M, Kelso J, Rebholz-Schuhmann D, Herre H. Hoehndorf R, et al. BMC Bioinformatics. 2010 Aug 31;11:441. doi: 10.1186/1471-2105-11-441. BMC Bioinformatics. 2010. PMID: 20807438 Free PMC article.

8

Facts from text--is text mining ready to deliver?

Rebholz-Schuhmann D, Kirsch H, Couto F. Rebholz-Schuhmann D, et al. PLoS Biol. 2005 Feb;3(2):e65. doi: 10.1371/journal.pbio.0030065. PLoS Biol. 2005. PMID: 15719064 Free PMC article.

9

Integrating protein-protein interactions and text mining for protein function prediction.

Jaeger S, Gaudan S, Leser U, Rebholz-Schuhmann D. Jaeger S, et al. BMC Bioinformatics. 2008 Jul 22;9 Suppl 8(Suppl 8):S2. doi: 10.1186/1471-2105-9-S8-S2. BMC Bioinformatics. 2008. PMID: 18673526 Free PMC article.

10

MeSH Up: effective MeSH text classification for improved document retrieval.

Trieschnigg D, Pezik P, Lee V, de Jong F, Kraaij W, Rebholz-Schuhmann D. Trieschnigg D, et al. Bioinformatics. 2009 Jun 1;25(11):1412-8. doi: 10.1093/bioinformatics/btp249. Epub 2009 Apr 17. Bioinformatics. 2009. PMID: 19376821 Free PMC article.

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