Degnan JH - Search Results

1

Genomics and genome-wide association studies: an integrative approach to expression QTL mapping.

Degnan JH, Lasky-Su J, Raby BA, Xu M, Molony C, Schadt EE, Lange C. Degnan JH, et al. Genomics. 2008 Sep;92(3):129-33. doi: 10.1016/j.ygeno.2008.05.012. Epub 2008 Jun 30. Genomics. 2008. PMID: 18586451 Free PMC article.

2

Genotype, haplotype and copy-number variation in worldwide human populations.

Jakobsson M, Scholz SW, Scheet P, Gibbs JR, VanLiere JM, Fung HC, Szpiech ZA, Degnan JH, Wang K, Guerreiro R, Bras JM, Schymick JC, Hernandez DG, Traynor BJ, Simon-Sanchez J, Matarin M, Britton A, van de Leemput J, Rafferty I, Bucan M, Cann HM, Hardy JA, Rosenberg NA, Singleton AB. Jakobsson M, et al. Among authors: degnan jh. Nature. 2008 Feb 21;451(7181):998-1003. doi: 10.1038/nature06742. Nature. 2008. PMID: 18288195 Free article.

3

Comparing spatial maps of human population-genetic variation using Procrustes analysis.

Wang C, Szpiech ZA, Degnan JH, Jakobsson M, Pemberton TJ, Hardy JA, Singleton AB, Rosenberg NA. Wang C, et al. Among authors: degnan jh. Stat Appl Genet Mol Biol. 2010;9(1):Article 13. doi: 10.2202/1544-6115.1493. Epub 2010 Jan 27. Stat Appl Genet Mol Biol. 2010. PMID: 20196748 Free PMC article.

4

Coalescence-time distributions in a serial founder model of human evolutionary history.

DeGiorgio M, Degnan JH, Rosenberg NA. DeGiorgio M, et al. Among authors: degnan jh. Genetics. 2011 Oct;189(2):579-93. doi: 10.1534/genetics.111.129296. Epub 2011 Jul 20. Genetics. 2011. PMID: 21775469 Free PMC article.

5

Evaluating variations on the STAR algorithm for relative efficiency and sample sizes needed to reconstruct species trees.

Degnan JH. Degnan JH. Pac Symp Biocomput. 2013:262-72. Pac Symp Biocomput. 2013. PMID: 23424131 Free article.

6

EFBAT: exact family-based association tests.

Schneiter K, Degnan JH, Corcoran C, Xu X, Laird N. Schneiter K, et al. Among authors: degnan jh. BMC Genet. 2007 Dec 20;8:86. doi: 10.1186/1471-2156-8-86. BMC Genet. 2007. PMID: 18096066 Free PMC article.

7

Properties of consensus methods for inferring species trees from gene trees.

Degnan JH, DeGiorgio M, Bryant D, Rosenberg NA. Degnan JH, et al. Syst Biol. 2009 Feb;58(1):35-54. doi: 10.1093/sysbio/syp008. Epub 2009 Jun 4. Syst Biol. 2009. PMID: 20525567 Free PMC article.

8

Fast and consistent estimation of species trees using supermatrix rooted triples.

DeGiorgio M, Degnan JH. DeGiorgio M, et al. Among authors: degnan jh. Mol Biol Evol. 2010 Mar;27(3):552-69. doi: 10.1093/molbev/msp250. Epub 2009 Oct 15. Mol Biol Evol. 2010. PMID: 19833741 Free PMC article.

9

Gene tree discordance, phylogenetic inference and the multispecies coalescent.

Degnan JH, Rosenberg NA. Degnan JH, et al. Trends Ecol Evol. 2009 Jun;24(6):332-40. doi: 10.1016/j.tree.2009.01.009. Epub 2009 Mar 21. Trends Ecol Evol. 2009. PMID: 19307040 Review.

10

Coalescent histories for discordant gene trees and species trees.

Rosenberg NA, Degnan JH. Rosenberg NA, et al. Among authors: degnan jh. Theor Popul Biol. 2010 May;77(3):145-51. doi: 10.1016/j.tpb.2009.12.004. Epub 2010 Jan 11. Theor Popul Biol. 2010. PMID: 20064540

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