Plevritis SK - Search Results

1

Boolean implication networks derived from large scale, whole genome microarray datasets.

Sahoo D, Dill DL, Gentles AJ, Tibshirani R, Plevritis SK. Sahoo D, et al. Among authors: plevritis sk. Genome Biol. 2008 Oct 30;9(10):R157. doi: 10.1186/gb-2008-9-10-r157. Genome Biol. 2008. PMID: 18973690 Free PMC article.

2

Risk Model-Based Lung Cancer Screening : A Cost-Effectiveness Analysis.

Toumazis I, Cao P, de Nijs K, Bastani M, Munshi V, Hemmati M, Ten Haaf K, Jeon J, Tammemägi M, Gazelle GS, Feuer EJ, Kong CY, Meza R, de Koning HJ, Plevritis SK, Han SS. Toumazis I, et al. Among authors: plevritis sk. Ann Intern Med. 2023 Mar;176(3):320-332. doi: 10.7326/M22-2216. Epub 2023 Feb 7. Ann Intern Med. 2023. PMID: 36745885 Free PMC article.

3

Extracting binary signals from microarray time-course data.

Sahoo D, Dill DL, Tibshirani R, Plevritis SK. Sahoo D, et al. Among authors: plevritis sk. Nucleic Acids Res. 2007;35(11):3705-12. doi: 10.1093/nar/gkm284. Epub 2007 May 21. Nucleic Acids Res. 2007. PMID: 17517782 Free PMC article.

4

Genomic and proteomic analysis reveals a threshold level of MYC required for tumor maintenance.

Shachaf CM, Gentles AJ, Elchuri S, Sahoo D, Soen Y, Sharpe O, Perez OD, Chang M, Mitchel D, Robinson WH, Dill D, Nolan GP, Plevritis SK, Felsher DW. Shachaf CM, et al. Among authors: plevritis sk. Cancer Res. 2008 Jul 1;68(13):5132-42. doi: 10.1158/0008-5472.CAN-07-6192. Cancer Res. 2008. PMID: 18593912 Free PMC article.

5

Fast calculation of pairwise mutual information for gene regulatory network reconstruction.

Qiu P, Gentles AJ, Plevritis SK. Qiu P, et al. Among authors: plevritis sk. Comput Methods Programs Biomed. 2009 May;94(2):177-80. doi: 10.1016/j.cmpb.2008.11.003. Epub 2009 Jan 22. Comput Methods Programs Biomed. 2009. PMID: 19167129

6

A pluripotency signature predicts histologic transformation and influences survival in follicular lymphoma patients.

Gentles AJ, Alizadeh AA, Lee SI, Myklebust JH, Shachaf CM, Shahbaba B, Levy R, Koller D, Plevritis SK. Gentles AJ, et al. Among authors: plevritis sk. Blood. 2009 Oct 8;114(15):3158-66. doi: 10.1182/blood-2009-02-202465. Epub 2009 Jul 27. Blood. 2009. PMID: 19636063 Free PMC article.

7

Ly6d marks the earliest stage of B-cell specification and identifies the branchpoint between B-cell and T-cell development.

Inlay MA, Bhattacharya D, Sahoo D, Serwold T, Seita J, Karsunky H, Plevritis SK, Dill DL, Weissman IL. Inlay MA, et al. Among authors: plevritis sk. Genes Dev. 2009 Oct 15;23(20):2376-81. doi: 10.1101/gad.1836009. Genes Dev. 2009. PMID: 19833765 Free PMC article.

8

Characterization of patient specific signaling via augmentation of Bayesian networks with disease and patient state nodes.

Sachs K, Gentles AJ, Youland R, Itani S, Irish J, Nolan GP, Plevritis SK. Sachs K, et al. Among authors: plevritis sk. Annu Int Conf IEEE Eng Med Biol Soc. 2009;2009:6624-7. doi: 10.1109/IEMBS.2009.5332563. Annu Int Conf IEEE Eng Med Biol Soc. 2009. PMID: 19963681 Free PMC article.

9

Reducing the computational complexity of information theoretic approaches for reconstructing gene regulatory networks.

Qiu P, Gentles AJ, Plevritis SK. Qiu P, et al. Among authors: plevritis sk. J Comput Biol. 2010 Feb;17(2):169-76. doi: 10.1089/cmb.2009.0052. J Comput Biol. 2010. PMID: 20078227 Free PMC article.

10

MiDReG: a method of mining developmentally regulated genes using Boolean implications.

Sahoo D, Seita J, Bhattacharya D, Inlay MA, Weissman IL, Plevritis SK, Dill DL. Sahoo D, et al. Among authors: plevritis sk. Proc Natl Acad Sci U S A. 2010 Mar 30;107(13):5732-7. doi: 10.1073/pnas.0913635107. Epub 2010 Mar 15. Proc Natl Acad Sci U S A. 2010. PMID: 20231483 Free PMC article.

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