Thieffry D - Search Results

1

Benoukraf T, Cauchy P, Fenouil R, Jeanniard A, Koch F, Jaeger S, Thieffry D, Imbert J, Andrau JC, Spicuglia S, Ferrier P. Benoukraf T, et al. Among authors: thieffry d. Bioinformatics. 2009 Apr 1;25(7):954-5. doi: 10.1093/bioinformatics/btp075. Epub 2009 Feb 4. Bioinformatics. 2009. PMID: 19193731 Free PMC article.

2

Qualitative modelling of regulated metabolic pathways: application to the tryptophan biosynthesis in E.coli.

Simão E, Remy E, Thieffry D, Chaouiya C. Simão E, et al. Among authors: thieffry d. Bioinformatics. 2005 Sep 1;21 Suppl 2:ii190-6. doi: 10.1093/bioinformatics/bti1130. Bioinformatics. 2005. PMID: 16204102

3

Epigenomics: large scale analysis of chromatin modifications and transcription factors/genome interactions.

Grange T, Imbert J, Thieffry D. Grange T, et al. Among authors: thieffry d. Bioessays. 2005 Nov;27(11):1203-5. doi: 10.1002/bies.20319. Bioessays. 2005. PMID: 16237667 No abstract available.

4

Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle.

Fauré A, Naldi A, Chaouiya C, Thieffry D. Fauré A, et al. Among authors: thieffry d. Bioinformatics. 2006 Jul 15;22(14):e124-31. doi: 10.1093/bioinformatics/btl210. Bioinformatics. 2006. PMID: 16873462

5

RSAT 2015: Regulatory Sequence Analysis Tools.

Medina-Rivera A, Defrance M, Sand O, Herrmann C, Castro-Mondragon JA, Delerce J, Jaeger S, Blanchet C, Vincens P, Caron C, Staines DM, Contreras-Moreira B, Artufel M, Charbonnier-Khamvongsa L, Hernandez C, Thieffry D, Thomas-Chollier M, van Helden J. Medina-Rivera A, et al. Among authors: thieffry d. Nucleic Acids Res. 2015 Jul 1;43(W1):W50-6. doi: 10.1093/nar/gkv362. Epub 2015 Apr 22. Nucleic Acids Res. 2015. PMID: 25904632 Free PMC article.

6

RSAT matrix-clustering: dynamic exploration and redundancy reduction of transcription factor binding motif collections.

Castro-Mondragon JA, Jaeger S, Thieffry D, Thomas-Chollier M, van Helden J. Castro-Mondragon JA, et al. Among authors: thieffry d. Nucleic Acids Res. 2017 Jul 27;45(13):e119. doi: 10.1093/nar/gkx314. Nucleic Acids Res. 2017. PMID: 28591841 Free PMC article.

7

MethMotif: an integrative cell specific database of transcription factor binding motifs coupled with DNA methylation profiles.

Xuan Lin QX, Sian S, An O, Thieffry D, Jha S, Benoukraf T. Xuan Lin QX, et al. Among authors: thieffry d. Nucleic Acids Res. 2019 Jan 8;47(D1):D145-D154. doi: 10.1093/nar/gky1005. Nucleic Acids Res. 2019. PMID: 30380113 Free PMC article.

8

Cooperation between T cell receptor and Toll-like receptor 5 signaling for CD4⁺ T cell activation.

Rodríguez-Jorge O, Kempis-Calanis LA, Abou-Jaoudé W, Gutiérrez-Reyna DY, Hernandez C, Ramirez-Pliego O, Thomas-Chollier M, Spicuglia S, Santana MA, Thieffry D. Rodríguez-Jorge O, et al. Among authors: thieffry d. Sci Signal. 2019 Apr 16;12(577):eaar3641. doi: 10.1126/scisignal.aar3641. Sci Signal. 2019. PMID: 30992399

9

TFregulomeR reveals transcription factors' context-specific features and functions.

Lin QXX, Thieffry D, Jha S, Benoukraf T. Lin QXX, et al. Among authors: thieffry d. Nucleic Acids Res. 2020 Jan 24;48(2):e10. doi: 10.1093/nar/gkz1088. Nucleic Acids Res. 2020. PMID: 31754708 Free PMC article.

10

IL-12 Signaling Contributes to the Reprogramming of Neonatal CD8⁺ T Cells.

Gutiérrez-Reyna DY, Cedillo-Baños A, Kempis-Calanis LA, Ramírez-Pliego O, Bargier L, Puthier D, Abad-Flores JD, Thomas-Chollier M, Thieffry D, Medina-Rivera A, Spicuglia S, Santana MA. Gutiérrez-Reyna DY, et al. Among authors: thieffry d. Front Immunol. 2020 Jun 5;11:1089. doi: 10.3389/fimmu.2020.01089. eCollection 2020. Front Immunol. 2020. PMID: 32582178 Free PMC article.

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