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Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds.
Bovine HapMap Consortium; Gibbs RA, Taylor JF, Van Tassell CP, Barendse W, Eversole KA, Gill CA, Green RD, Hamernik DL, Kappes SM, Lien S, Matukumalli LK, McEwan JC, Nazareth LV, Schnabel RD, Weinstock GM, Wheeler DA, Ajmone-Marsan P, Boettcher PJ, Caetano AR, Garcia JF, Hanotte O, Mariani P, Skow LC, Sonstegard TS, Williams JL, Diallo B, Hailemariam L, Martinez ML, Morris CA, Silva LO, Spelman RJ, Mulatu W, Zhao K, Abbey CA, Agaba M, Araujo FR, Bunch RJ, Burton J, Gorni C, Olivier H, Harrison BE, Luff B, Machado MA, Mwakaya J, Plastow G, Sim W, Smith T, Thomas MB, Valentini A, Williams P, Womack J, Woolliams JA, Liu Y, Qin X, Worley KC, Gao C, Jiang H, Moore SS, Ren Y, Song XZ, Bustamante CD, Hernandez RD, Muzny DM, Patil S, San Lucas A, Fu Q, Kent MP, Vega R, Matukumalli A, McWilliam S, Sclep G, Bryc K, Choi J, Gao H, Grefenstette JJ, Murdoch B, Stella A, Villa-Angulo R, Wright M, Aerts J, Jann O, Negrini R, Goddard ME, Hayes BJ, Bradley DG, Barbosa da Silva M, Lau LP, Liu GE, Lynn DJ, Panzitta F, Dodds KG. Bovine HapMap Consortium, et al. Among authors: grefenstette jj. Science. 2009 Apr 24;324(5926):528-32. doi: 10.1126/science.1167936. Science. 2009. PMID: 19390050 Free PMC article.
High-resolution haplotype block structure in the cattle genome.
Villa-Angulo R, Matukumalli LK, Gill CA, Choi J, Van Tassell CP, Grefenstette JJ. Villa-Angulo R, et al. Among authors: grefenstette jj. BMC Genet. 2009 Apr 24;10:19. doi: 10.1186/1471-2156-10-19. BMC Genet. 2009. PMID: 19393054 Free PMC article.
Application of machine learning in SNP discovery.
Matukumalli LK, Grefenstette JJ, Hyten DL, Choi IY, Cregan PB, Van Tassell CP. Matukumalli LK, et al. Among authors: grefenstette jj. BMC Bioinformatics. 2006 Jan 6;7:4. doi: 10.1186/1471-2105-7-4. BMC Bioinformatics. 2006. PMID: 16398931 Free PMC article.
SNP-PHAGE--High throughput SNP discovery pipeline.
Matukumalli LK, Grefenstette JJ, Hyten DL, Choi IY, Cregan PB, Van Tassell CP. Matukumalli LK, et al. Among authors: grefenstette jj. BMC Bioinformatics. 2006 Oct 23;7:468. doi: 10.1186/1471-2105-7-468. BMC Bioinformatics. 2006. PMID: 17059604 Free PMC article.
EST-PAGE--managing and analyzing EST data.
Matukumalli LK, Grefenstette JJ, Sonstegard TS, Van Tassell CP. Matukumalli LK, et al. Among authors: grefenstette jj. Bioinformatics. 2004 Jan 22;20(2):286-8. doi: 10.1093/bioinformatics/btg411. Bioinformatics. 2004. PMID: 14734326
Detecting critical slowing down in high-dimensional epidemiological systems.
Brett T, Ajelli M, Liu QH, Krauland MG, Grefenstette JJ, van Panhuis WG, Vespignani A, Drake JM, Rohani P. Brett T, et al. Among authors: grefenstette jj. PLoS Comput Biol. 2020 Mar 9;16(3):e1007679. doi: 10.1371/journal.pcbi.1007679. eCollection 2020 Mar. PLoS Comput Biol. 2020. PMID: 32150536 Free PMC article.
Prevention of Hepatitis C by Screening and Treatment in U.S. Prisons.
He T, Li K, Roberts MS, Spaulding AC, Ayer T, Grefenstette JJ, Chhatwal J. He T, et al. Among authors: grefenstette jj. Ann Intern Med. 2016 Jan 19;164(2):84-92. doi: 10.7326/M15-0617. Epub 2015 Nov 24. Ann Intern Med. 2016. PMID: 26595252 Free PMC article.
25 results