Koonin EV - Search Results

1

Conformational flexibility and molecular interactions of an archaeal homologue of the Shwachman-Bodian-Diamond syndrome protein.

Ng CL, Waterman DG, Koonin EV, Walters AD, Chong JP, Isupov MN, Lebedev AA, Bunka DH, Stockley PG, Ortiz-Lombardía M, Antson AA. Ng CL, et al. Among authors: koonin ev. BMC Struct Biol. 2009 May 19;9:32. doi: 10.1186/1472-6807-9-32. BMC Struct Biol. 2009. PMID: 19454024 Free PMC article.

2

Crystal structure of Mil (Mth680): internal duplication and similarity between the Imp4/Brix domain and the anticodon-binding domain of class IIa aminoacyl-tRNA synthetases.

Ng CL, Waterman D, Koonin EV, Antson AA, Ortiz-Lombardía M. Ng CL, et al. Among authors: koonin ev. EMBO Rep. 2005 Feb;6(2):140-6. doi: 10.1038/sj.embor.7400328. EMBO Rep. 2005. PMID: 15654320 Free PMC article.

3

Crystal structure of Bacillus anthracis ThiI, a tRNA-modifying enzyme containing the predicted RNA-binding THUMP domain.

Waterman DG, Ortiz-Lombardía M, Fogg MJ, Koonin EV, Antson AA. Waterman DG, et al. Among authors: koonin ev. J Mol Biol. 2006 Feb 10;356(1):97-110. doi: 10.1016/j.jmb.2005.11.013. Epub 2005 Nov 22. J Mol Biol. 2006. PMID: 16343540

4

Structure and activity of a novel archaeal β-CASP protein with N-terminal KH domains.

Silva AP, Chechik M, Byrne RT, Waterman DG, Ng CL, Dodson EJ, Koonin EV, Antson AA, Smits C. Silva AP, et al. Among authors: koonin ev. Structure. 2011 May 11;19(5):622-32. doi: 10.1016/j.str.2011.03.002. Structure. 2011. PMID: 21565697 Free PMC article.

5

Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases.

Byrne RT, Jenkins HT, Peters DT, Whelan F, Stowell J, Aziz N, Kasatsky P, Rodnina MV, Koonin EV, Konevega AL, Antson AA. Byrne RT, et al. Among authors: koonin ev. Proc Natl Acad Sci U S A. 2015 May 12;112(19):6033-7. doi: 10.1073/pnas.1500161112. Epub 2015 Apr 22. Proc Natl Acad Sci U S A. 2015. PMID: 25902496 Free PMC article.

6

Structural atlas of a human gut crassvirus.

Bayfield OW, Shkoporov AN, Yutin N, Khokhlova EV, Smith JLR, Hawkins DEDP, Koonin EV, Hill C, Antson AA. Bayfield OW, et al. Among authors: koonin ev. Nature. 2023 May;617(7960):409-416. doi: 10.1038/s41586-023-06019-2. Epub 2023 May 3. Nature. 2023. PMID: 37138077 Free PMC article.

7

Evolutionary connection between the catalytic subunits of DNA-dependent RNA polymerases and eukaryotic RNA-dependent RNA polymerases and the origin of RNA polymerases.

Iyer LM, Koonin EV, Aravind L. Iyer LM, et al. Among authors: koonin ev. BMC Struct Biol. 2003 Jan 28;3:1. doi: 10.1186/1472-6807-3-1. Epub 2003 Jan 28. BMC Struct Biol. 2003. PMID: 12553882 Free PMC article.

8

Dimeric dUTPases, HisE, and MazG belong to a new superfamily of all-alpha NTP pyrophosphohydrolases with potential "house-cleaning" functions.

Moroz OV, Murzin AG, Makarova KS, Koonin EV, Wilson KS, Galperin MY. Moroz OV, et al. Among authors: koonin ev. J Mol Biol. 2005 Mar 25;347(2):243-55. doi: 10.1016/j.jmb.2005.01.030. Epub 2005 Jan 27. J Mol Biol. 2005. PMID: 15740738

9

The evolutionary journey of Argonaute proteins.

Swarts DC, Makarova K, Wang Y, Nakanishi K, Ketting RF, Koonin EV, Patel DJ, van der Oost J. Swarts DC, et al. Among authors: koonin ev. Nat Struct Mol Biol. 2014 Sep;21(9):743-53. doi: 10.1038/nsmb.2879. Nat Struct Mol Biol. 2014. PMID: 25192263 Free PMC article. Review.

10

Modified base-binding EVE and DCD domains: striking diversity of genomic contexts in prokaryotes and predicted involvement in a variety of cellular processes.

Bell RT, Wolf YI, Koonin EV. Bell RT, et al. Among authors: koonin ev. BMC Biol. 2020 Nov 4;18(1):159. doi: 10.1186/s12915-020-00885-2. BMC Biol. 2020. PMID: 33148243 Free PMC article.

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