Aach J - Search Results

1

Digital RNA allelotyping reveals tissue-specific and allele-specific gene expression in human.

Zhang K, Li JB, Gao Y, Egli D, Xie B, Deng J, Li Z, Lee JH, Aach J, Leproust EM, Eggan K, Church GM. Zhang K, et al. Among authors: aach j. Nat Methods. 2009 Aug;6(8):613-8. doi: 10.1038/nmeth.1357. Epub 2009 Jul 20. Nat Methods. 2009. PMID: 19620972 Free PMC article.

2

Fluorescent in situ sequencing (FISSEQ) of RNA for gene expression profiling in intact cells and tissues.

Lee JH, Daugharthy ER, Scheiman J, Kalhor R, Ferrante TC, Terry R, Turczyk BM, Yang JL, Lee HS, Aach J, Zhang K, Church GM. Lee JH, et al. Among authors: aach j. Nat Protoc. 2015 Mar;10(3):442-58. doi: 10.1038/nprot.2014.191. Epub 2015 Feb 12. Nat Protoc. 2015. PMID: 25675209 Free PMC article.

3

Long-range polony haplotyping of individual human chromosome molecules.

Zhang K, Zhu J, Shendure J, Porreca GJ, Aach JD, Mitra RD, Church GM. Zhang K, et al. Among authors: aach jd. Nat Genet. 2006 Mar;38(3):382-7. doi: 10.1038/ng1741. Epub 2006 Feb 19. Nat Genet. 2006. PMID: 16493423

4

Multiplex padlock targeted sequencing reveals human hypermutable CpG variations.

Li JB, Gao Y, Aach J, Zhang K, Kryukov GV, Xie B, Ahlford A, Yoon JK, Rosenbaum AM, Zaranek AW, LeProust E, Sunyaev SR, Church GM. Li JB, et al. Among authors: aach j. Genome Res. 2009 Sep;19(9):1606-15. doi: 10.1101/gr.092213.109. Epub 2009 Jun 12. Genome Res. 2009. PMID: 19525355 Free PMC article.

5

Targeted and genome-wide sequencing reveal single nucleotide variations impacting specificity of Cas9 in human stem cells.

Yang L, Grishin D, Wang G, Aach J, Zhang CZ, Chari R, Homsy J, Cai X, Zhao Y, Fan JB, Seidman C, Seidman J, Pu W, Church G. Yang L, et al. Among authors: aach j. Nat Commun. 2014 Nov 26;5:5507. doi: 10.1038/ncomms6507. Nat Commun. 2014. PMID: 25425480 Free PMC article.

6

Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing.

Li JB, Levanon EY, Yoon JK, Aach J, Xie B, Leproust E, Zhang K, Gao Y, Church GM. Li JB, et al. Among authors: aach j. Science. 2009 May 29;324(5931):1210-3. doi: 10.1126/science.1170995. Science. 2009. PMID: 19478186

7

Barcoding cells using cell-surface programmable DNA-binding domains.

Mali P, Aach J, Lee JH, Levner D, Nip L, Church GM. Mali P, et al. Among authors: aach j. Nat Methods. 2013 May;10(5):403-6. doi: 10.1038/nmeth.2407. Epub 2013 Mar 17. Nat Methods. 2013. PMID: 23503053 Free PMC article.

8

Multiplex single-molecule interaction profiling of DNA-barcoded proteins.

Gu L, Li C, Aach J, Hill DE, Vidal M, Church GM. Gu L, et al. Among authors: aach j. Nature. 2014 Nov 27;515(7528):554-7. doi: 10.1038/nature13761. Epub 2014 Sep 21. Nature. 2014. PMID: 25252978 Free PMC article.

9

Chromosome-scale, haplotype-resolved assembly of human genomes.

Garg S, Fungtammasan A, Carroll A, Chou M, Schmitt A, Zhou X, Mac S, Peluso P, Hatas E, Ghurye J, Maguire J, Mahmoud M, Cheng H, Heller D, Zook JM, Moemke T, Marschall T, Sedlazeck FJ, Aach J, Chin CS, Church GM, Li H. Garg S, et al. Among authors: aach j. Nat Biotechnol. 2021 Mar;39(3):309-312. doi: 10.1038/s41587-020-0711-0. Epub 2020 Dec 7. Nat Biotechnol. 2021. PMID: 33288905 Free PMC article.

10

Characterizing the portability of phage-encoded homologous recombination proteins.

Filsinger GT, Wannier TM, Pedersen FB, Lutz ID, Zhang J, Stork DA, Debnath A, Gozzi K, Kuchwara H, Volf V, Wang S, Rios X, Gregg CJ, Lajoie MJ, Shipman SL, Aach J, Laub MT, Church GM. Filsinger GT, et al. Among authors: aach j. Nat Chem Biol. 2021 Apr;17(4):394-402. doi: 10.1038/s41589-020-00710-5. Epub 2021 Jan 18. Nat Chem Biol. 2021. PMID: 33462496 Free PMC article.

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