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Recurated protein interaction datasets.
Salwinski L, Licata L, Winter A, Thorneycroft D, Khadake J, Ceol A, Aryamontri AC, Oughtred R, Livstone M, Boucher L, Botstein D, Dolinski K, Berardini T, Huala E, Tyers M, Eisenberg D, Cesareni G, Hermjakob H. Salwinski L, et al. Among authors: thorneycroft d. Nat Methods. 2009 Dec;6(12):860-1. doi: 10.1038/nmeth1209-860. Nat Methods. 2009. PMID: 19935838 No abstract available.
MINT and IntAct contribute to the Second BioCreative challenge: serving the text-mining community with high quality molecular interaction data.
Chatr-aryamontri A, Kerrien S, Khadake J, Orchard S, Ceol A, Licata L, Castagnoli L, Costa S, Derow C, Huntley R, Aranda B, Leroy C, Thorneycroft D, Apweiler R, Cesareni G, Hermjakob H. Chatr-aryamontri A, et al. Among authors: thorneycroft d. Genome Biol. 2008;9 Suppl 2(Suppl 2):S5. doi: 10.1186/gb-2008-9-s2-s5. Epub 2008 Sep 1. Genome Biol. 2008. PMID: 18834496 Free PMC article.
PRIDE: new developments and new datasets.
Jones P, Côté RG, Cho SY, Klie S, Martens L, Quinn AF, Thorneycroft D, Hermjakob H. Jones P, et al. Among authors: thorneycroft d. Nucleic Acids Res. 2008 Jan;36(Database issue):D878-83. doi: 10.1093/nar/gkm1021. Epub 2007 Nov 22. Nucleic Acids Res. 2008. PMID: 18033805 Free PMC article.
Capturing variation impact on molecular interactions in the IMEx Consortium mutations data set.
IMEx Consortium Curators; Del-Toro N, Duesbury M, Koch M, Perfetto L, Shrivastava A, Ochoa D, Wagih O, Piñero J, Kotlyar M, Pastrello C, Beltrao P, Furlong LI, Jurisica I, Hermjakob H, Orchard S, Porras P. IMEx Consortium Curators, et al. Nat Commun. 2019 Jan 2;10(1):10. doi: 10.1038/s41467-018-07709-6. Nat Commun. 2019. PMID: 30602777 Free PMC article.
IntAct--open source resource for molecular interaction data.
Kerrien S, Alam-Faruque Y, Aranda B, Bancarz I, Bridge A, Derow C, Dimmer E, Feuermann M, Friedrichsen A, Huntley R, Kohler C, Khadake J, Leroy C, Liban A, Lieftink C, Montecchi-Palazzi L, Orchard S, Risse J, Robbe K, Roechert B, Thorneycroft D, Zhang Y, Apweiler R, Hermjakob H. Kerrien S, et al. Among authors: thorneycroft d. Nucleic Acids Res. 2007 Jan;35(Database issue):D561-5. doi: 10.1093/nar/gkl958. Epub 2006 Dec 1. Nucleic Acids Res. 2007. PMID: 17145710 Free PMC article.
Charting plant interactomes: possibilities and challenges.
Morsy M, Gouthu S, Orchard S, Thorneycroft D, Harper JF, Mittler R, Cushman JC. Morsy M, et al. Among authors: thorneycroft d. Trends Plant Sci. 2008 Apr;13(4):183-91. doi: 10.1016/j.tplants.2008.01.006. Epub 2008 Mar 7. Trends Plant Sci. 2008. PMID: 18329319 Review.
Diurnal changes in the transcriptome encoding enzymes of starch metabolism provide evidence for both transcriptional and posttranscriptional regulation of starch metabolism in Arabidopsis leaves.
Smith SM, Fulton DC, Chia T, Thorneycroft D, Chapple A, Dunstan H, Hylton C, Zeeman SC, Smith AM. Smith SM, et al. Among authors: thorneycroft d. Plant Physiol. 2004 Sep;136(1):2687-99. doi: 10.1104/pp.104.044347. Epub 2004 Sep 3. Plant Physiol. 2004. PMID: 15347792 Free PMC article.
18 results