Neretti N - Search Results

1

Regulation of gene expression in hepatic cells by the mammalian Target of Rapamycin (mTOR).

Jimenez RH, Lee JS, Francesconi M, Castellani G, Neretti N, Sanders JA, Sedivy J, Gruppuso PA. Jimenez RH, et al. Among authors: neretti n. PLoS One. 2010 Feb 5;5(2):e9084. doi: 10.1371/journal.pone.0009084. PLoS One. 2010. PMID: 20140209 Free PMC article.

2

Targeting c-Myc-activated genes with a correlation method: detection of global changes in large gene expression network dynamics.

Remondini D, O'Connell B, Intrator N, Sedivy JM, Neretti N, Castellani GC, Cooper LN. Remondini D, et al. Among authors: neretti n. Proc Natl Acad Sci U S A. 2005 May 10;102(19):6902-6. doi: 10.1073/pnas.0502081102. Epub 2005 May 2. Proc Natl Acad Sci U S A. 2005. PMID: 15867157 Free PMC article.

3

Correlation analysis reveals the emergence of coherence in the gene expression dynamics following system perturbation.

Neretti N, Remondini D, Tatar M, Sedivy JM, Pierini M, Mazzatti D, Powell J, Franceschi C, Castellani GC. Neretti N, et al. BMC Bioinformatics. 2007 Mar 8;8 Suppl 1(Suppl 1):S16. doi: 10.1186/1471-2105-8-S1-S16. BMC Bioinformatics. 2007. PMID: 17430560 Free PMC article.

4

The oncogene c-Myc coordinates regulation of metabolic networks to enable rapid cell cycle entry.

Morrish F, Neretti N, Sedivy JM, Hockenbery DM. Morrish F, et al. Among authors: neretti n. Cell Cycle. 2008 Apr 15;7(8):1054-66. doi: 10.4161/cc.7.8.5739. Epub 2008 Feb 8. Cell Cycle. 2008. PMID: 18414044 Free PMC article.

5

Reconstructing networks of pathways via significance analysis of their intersections.

Francesconi M, Remondini D, Neretti N, Sedivy JM, Cooper LN, Verondini E, Milanesi L, Castellani G. Francesconi M, et al. Among authors: neretti n. BMC Bioinformatics. 2008 Apr 25;9 Suppl 4(Suppl 4):S9. doi: 10.1186/1471-2105-9-S4-S9. BMC Bioinformatics. 2008. PMID: 18460182 Free PMC article.

6

Global regulation of nucleotide biosynthetic genes by c-Myc.

Liu YC, Li F, Handler J, Huang CR, Xiang Y, Neretti N, Sedivy JM, Zeller KI, Dang CV. Liu YC, et al. Among authors: neretti n. PLoS One. 2008 Jul 16;3(7):e2722. doi: 10.1371/journal.pone.0002722. PLoS One. 2008. PMID: 18628958 Free PMC article.

7

Kinetic profiling of the c-Myc transcriptome and bioinformatic analysis of repressed gene promoters.

Yap CS, Peterson AL, Castellani G, Sedivy JM, Neretti N. Yap CS, et al. Among authors: neretti n. Cell Cycle. 2011 Jul 1;10(13):2184-96. doi: 10.4161/cc.10.13.16249. Epub 2011 Jul 1. Cell Cycle. 2011. PMID: 21623162 Free PMC article.

8

Genomes of replicatively senescent cells undergo global epigenetic changes leading to gene silencing and activation of transposable elements.

De Cecco M, Criscione SW, Peckham EJ, Hillenmeyer S, Hamm EA, Manivannan J, Peterson AL, Kreiling JA, Neretti N, Sedivy JM. De Cecco M, et al. Among authors: neretti n. Aging Cell. 2013 Apr;12(2):247-56. doi: 10.1111/acel.12047. Epub 2013 Jan 30. Aging Cell. 2013. PMID: 23360310 Free PMC article.

9

Hepatic signaling by the mechanistic target of rapamycin complex 2 (mTORC2).

Lamming DW, Demirkan G, Boylan JM, Mihaylova MM, Peng T, Ferreira J, Neretti N, Salomon A, Sabatini DM, Gruppuso PA. Lamming DW, et al. Among authors: neretti n. FASEB J. 2014 Jan;28(1):300-15. doi: 10.1096/fj.13-237743. Epub 2013 Sep 26. FASEB J. 2014. PMID: 24072782 Free PMC article.

10

Death by transposition - the enemy within?

Sedivy JM, Kreiling JA, Neretti N, De Cecco M, Criscione SW, Hofmann JW, Zhao X, Ito T, Peterson AL. Sedivy JM, et al. Among authors: neretti n. Bioessays. 2013 Dec;35(12):1035-43. doi: 10.1002/bies.201300097. Epub 2013 Oct 15. Bioessays. 2013. PMID: 24129940 Free PMC article.

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