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Functional cis-regulatory genomics for systems biology.
Proc Natl Acad Sci U S A. 2010 Feb 23;107(8):3930-5. doi: 10.1073/pnas.1000147107. Epub 2010 Feb 8.
Proc Natl Acad Sci U S A. 2010.
PMID: 20142491
Free PMC article.
Practical computational methods for regulatory genomics: a cisGRN-Lexicon and cisGRN-browser for gene regulatory networks.
Istrail S, Tarpine R, Schutter K, Aguiar D.
Istrail S, et al. Among authors: tarpine r.
Methods Mol Biol. 2010;674:369-99. doi: 10.1007/978-1-60761-854-6_22.
Methods Mol Biol. 2010.
PMID: 20827603
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The imperfect ancestral recombination graph reconstruction problem: upper bounds for recombination and homoplasy.
Lam F, Tarpine R, Istrail S.
Lam F, et al. Among authors: tarpine r.
J Comput Biol. 2010 Jun;17(6):767-81. doi: 10.1089/cmb.2009.0249.
J Comput Biol. 2010.
PMID: 20583925
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The Clark phaseable sample size problem: long-range phasing and loss of heterozygosity in GWAS.
Halldórsson BV, Aguiar D, Tarpine R, Istrail S.
Halldórsson BV, et al. Among authors: tarpine r.
J Comput Biol. 2011 Mar;18(3):323-33. doi: 10.1089/cmb.2010.0288.
J Comput Biol. 2011.
PMID: 21385037
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