Hackermüller J - Search Results

1

The primary transcriptome of the major human pathogen Helicobacter pylori.

Sharma CM, Hoffmann S, Darfeuille F, Reignier J, Findeiss S, Sittka A, Chabas S, Reiche K, Hackermüller J, Reinhardt R, Stadler PF, Vogel J. Sharma CM, et al. Among authors: hackermuller j. Nature. 2010 Mar 11;464(7286):250-5. doi: 10.1038/nature08756. Epub 2010 Feb 17. Nature. 2010. PMID: 20164839

2

Computational RNomics of drosophilids.

Rose D, Hackermüller J, Washietl S, Reiche K, Hertel J, Findeiss S, Stadler PF, Prohaska SJ. Rose D, et al. Among authors: hackermuller j. BMC Genomics. 2007 Nov 8;8:406. doi: 10.1186/1471-2164-8-406. BMC Genomics. 2007. PMID: 17996037 Free PMC article.

3

NcDNAlign: plausible multiple alignments of non-protein-coding genomic sequences.

Rose D, Hertel J, Reiche K, Stadler PF, Hackermüller J. Rose D, et al. Among authors: hackermuller j. Genomics. 2008 Jul;92(1):65-74. doi: 10.1016/j.ygeno.2008.04.003. Epub 2008 Jun 3. Genomics. 2008. PMID: 18511233 Free article.

4

Detection of small RNAs in Pseudomonas aeruginosa by RNomics and structure-based bioinformatic tools.

Sonnleitner E, Sorger-Domenigg T, Madej MJ, Findeiss S, Hackermüller J, Hüttenhofer A, Stadler PF, Bläsi U, Moll I. Sonnleitner E, et al. Among authors: hackermuller j. Microbiology (Reading). 2008 Oct;154(Pt 10):3175-3187. doi: 10.1099/mic.0.2008/019703-0. Microbiology (Reading). 2008. PMID: 18832323 Free article.

5

Duplicated RNA genes in teleost fish genomes.

Rose D, Jöris J, Hackermüller J, Reiche K, Li Q, Stadler PF. Rose D, et al. Among authors: hackermuller j. J Bioinform Comput Biol. 2008 Dec;6(6):1157-75. doi: 10.1142/s0219720008003886. J Bioinform Comput Biol. 2008. PMID: 19090022

6

Evolution of vault RNAs.

Stadler PF, Chen JJ, Hackermüller J, Hoffmann S, Horn F, Khaitovich P, Kretzschmar AK, Mosig A, Prohaska SJ, Qi X, Schutt K, Ullmann K. Stadler PF, et al. Among authors: hackermuller j. Mol Biol Evol. 2009 Sep;26(9):1975-91. doi: 10.1093/molbev/msp112. Epub 2009 Jun 2. Mol Biol Evol. 2009. PMID: 19491402

7

Fast mapping of short sequences with mismatches, insertions and deletions using index structures.

Hoffmann S, Otto C, Kurtz S, Sharma CM, Khaitovich P, Vogel J, Stadler PF, Hackermüller J. Hoffmann S, et al. Among authors: hackermuller j. PLoS Comput Biol. 2009 Sep;5(9):e1000502. doi: 10.1371/journal.pcbi.1000502. Epub 2009 Sep 11. PLoS Comput Biol. 2009. PMID: 19750212 Free PMC article.

8

Computational discovery of human coding and non-coding transcripts with conserved splice sites.

Rose D, Hiller M, Schutt K, Hackermüller J, Backofen R, Stadler PF. Rose D, et al. Among authors: hackermuller j. Bioinformatics. 2011 Jul 15;27(14):1894-900. doi: 10.1093/bioinformatics/btr314. Epub 2011 May 26. Bioinformatics. 2011. PMID: 21622663

9

CEM-designer: design of custom expression microarrays in the post-ENCODE Era.

Arnold C, Externbrink F, Hackermüller J, Reiche K. Arnold C, et al. Among authors: hackermuller j. J Biotechnol. 2014 Nov 10;189:154-6. doi: 10.1016/j.jbiotec.2014.09.012. Epub 2014 Sep 28. J Biotechnol. 2014. PMID: 25262644

10

STAT3-induced long noncoding RNAs in multiple myeloma cells display different properties in cancer.

Binder S, Hösler N, Riedel D, Zipfel I, Buschmann T, Kämpf C, Reiche K, Burger R, Gramatzki M, Hackermüller J, Stadler PF, Horn F. Binder S, et al. Among authors: hackermuller j. Sci Rep. 2017 Aug 11;7(1):7976. doi: 10.1038/s41598-017-08348-5. Sci Rep. 2017. PMID: 28801664 Free PMC article.

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