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Genome-wide demethylation of Arabidopsis endosperm.
Hsieh TF, Ibarra CA, Silva P, Zemach A, Eshed-Williams L, Fischer RL, Zilberman D. Hsieh TF, et al. Among authors: silva p. Science. 2009 Jun 12;324(5933):1451-4. doi: 10.1126/science.1172417. Science. 2009. PMID: 19520962 Free PMC article.
Local DNA hypomethylation activates genes in rice endosperm.
Zemach A, Kim MY, Silva P, Rodrigues JA, Dotson B, Brooks MD, Zilberman D. Zemach A, et al. Among authors: silva p. Proc Natl Acad Sci U S A. 2010 Oct 26;107(43):18729-34. doi: 10.1073/pnas.1009695107. Epub 2010 Oct 11. Proc Natl Acad Sci U S A. 2010. PMID: 20937895 Free PMC article.
Regulation of imprinted gene expression in Arabidopsis endosperm.
Hsieh TF, Shin J, Uzawa R, Silva P, Cohen S, Bauer MJ, Hashimoto M, Kirkbride RC, Harada JJ, Zilberman D, Fischer RL. Hsieh TF, et al. Among authors: silva p. Proc Natl Acad Sci U S A. 2011 Feb 1;108(5):1755-62. doi: 10.1073/pnas.1019273108. Epub 2011 Jan 21. Proc Natl Acad Sci U S A. 2011. PMID: 21257907 Free PMC article.
Sequencing the transcriptome of milk production: milk trumps mammary tissue.
Lemay DG, Hovey RC, Hartono SR, Hinde K, Smilowitz JT, Ventimiglia F, Schmidt KA, Lee JW, Islas-Trejo A, Silva PI, Korf I, Medrano JF, Barry PA, German JB. Lemay DG, et al. BMC Genomics. 2013 Dec 12;14:872. doi: 10.1186/1471-2164-14-872. BMC Genomics. 2013. PMID: 24330573 Free PMC article.
Cancer-specific epigenome identifies oncogenic hijacking by nuclear factor I family proteins for medulloblastoma progression.
Shiraishi R, Cancila G, Kumegawa K, Torrejon J, Basili I, Bernardi F, Silva PBGD, Wang W, Chapman O, Yang L, Jami M, Nishitani K, Arai Y, Xiao Z, Yu H, Lo Re V, Marsaud V, Talbot J, Lombard B, Loew D, Jingu M, Okonechnikov K, Sone M, Motohashi N, Aoki Y, Pfister SM, Chavez L, Hoshino M, Maruyama R, Ayrault O, Kawauchi D. Shiraishi R, et al. Among authors: silva pbgd. Dev Cell. 2024 May 31:S1534-5807(24)00330-7. doi: 10.1016/j.devcel.2024.05.013. Online ahead of print. Dev Cell. 2024. PMID: 38834071
Addressing docking pose selection with structure-based deep learning: Recent advances, challenges and opportunities.
Vittorio S, Lunghini F, Morerio P, Gadioli D, Orlandini S, Silva P, Jan Martinovic, Pedretti A, Bonanni D, Del Bue A, Palermo G, Vistoli G, Beccari AR. Vittorio S, et al. Among authors: silva p. Comput Struct Biotechnol J. 2024 May 18;23:2141-2151. doi: 10.1016/j.csbj.2024.05.024. eCollection 2024 Dec. Comput Struct Biotechnol J. 2024. PMID: 38827235 Free PMC article. Review.
5,154 results