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Odefy--from discrete to continuous models.
BMC Bioinformatics. 2010 May 7;11:233. doi: 10.1186/1471-2105-11-233.
BMC Bioinformatics. 2010.
PMID: 20459647
Free PMC article.
Transforming Boolean models to continuous models: methodology and application to T-cell receptor signaling.
Wittmann DM, Krumsiek J, Saez-Rodriguez J, Lauffenburger DA, Klamt S, Theis FJ.
Wittmann DM, et al.
BMC Syst Biol. 2009 Sep 28;3:98. doi: 10.1186/1752-0509-3-98.
BMC Syst Biol. 2009.
PMID: 19785753
Free PMC article.
Item in Clipboard
Biologically meaningful update rules increase the critical connectivity of generalized Kauffman networks.
Wittmann DM, Marr C, Theis FJ.
Wittmann DM, et al.
J Theor Biol. 2010 Oct 7;266(3):436-48. doi: 10.1016/j.jtbi.2010.07.007. Epub 2010 Jul 21.
J Theor Biol. 2010.
PMID: 20654629
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Sharpening of expression domains induced by transcription and microRNA regulation within a spatio-temporal model of mid-hindbrain boundary formation.
Hock S, Ng YK, Hasenauer J, Wittmann D, Lutter D, Trümbach D, Wurst W, Prakash N, Theis FJ.
Hock S, et al.
BMC Syst Biol. 2013 Jun 25;7:48. doi: 10.1186/1752-0509-7-48.
BMC Syst Biol. 2013.
PMID: 23799959
Free PMC article.
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Spatial analysis of expression patterns predicts genetic interactions at the mid-hindbrain boundary.
Wittmann DM, Blöchl F, Trümbach D, Wurst W, Prakash N, Theis FJ.
Wittmann DM, et al.
PLoS Comput Biol. 2009 Nov;5(11):e1000569. doi: 10.1371/journal.pcbi.1000569. Epub 2009 Nov 20.
PLoS Comput Biol. 2009.
PMID: 19936059
Free PMC article.
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Effective parameters determining the information flow in hierarchical biological systems.
Blöchl F, Wittmann DM, Theis FJ.
Blöchl F, et al. Among authors: wittmann dm.
Bull Math Biol. 2011 Apr;73(4):706-25. doi: 10.1007/s11538-010-9604-6. Epub 2010 Dec 23.
Bull Math Biol. 2011.
PMID: 21181504
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