Bruno VM - Search Results

1

Comprehensive annotation of the transcriptome of the human fungal pathogen Candida albicans using RNA-seq.

Bruno VM, Wang Z, Marjani SL, Euskirchen GM, Martin J, Sherlock G, Snyder M. Bruno VM, et al. Genome Res. 2010 Oct;20(10):1451-8. doi: 10.1101/gr.109553.110. Epub 2010 Sep 1. Genome Res. 2010. PMID: 20810668 Free PMC article.

2

Rnnotator: an automated de novo transcriptome assembly pipeline from stranded RNA-Seq reads.

Martin J, Bruno VM, Fang Z, Meng X, Blow M, Zhang T, Sherlock G, Snyder M, Wang Z. Martin J, et al. Among authors: bruno vm. BMC Genomics. 2010 Nov 24;11:663. doi: 10.1186/1471-2164-11-663. BMC Genomics. 2010. PMID: 21106091 Free PMC article.

3

Molecular mechanisms of ethanol-induced pathogenesis revealed by RNA-sequencing.

Camarena L, Bruno V, Euskirchen G, Poggio S, Snyder M. Camarena L, et al. PLoS Pathog. 2010 Apr 1;6(4):e1000834. doi: 10.1371/journal.ppat.1000834. PLoS Pathog. 2010. PMID: 20368969 Free PMC article.

4

Identification of genes critical for resistance to infection by West Nile virus using RNA-Seq analysis.

Qian F, Chung L, Zheng W, Bruno V, Alexander RP, Wang Z, Wang X, Kurscheid S, Zhao H, Fikrig E, Gerstein M, Snyder M, Montgomery RR. Qian F, et al. Viruses. 2013 Jul 8;5(7):1664-81. doi: 10.3390/v5071664. Viruses. 2013. PMID: 23881275 Free PMC article.

5

Regulation of azole drug susceptibility by Candida albicans protein kinase CK2.

Bruno VM, Mitchell AP. Bruno VM, et al. Mol Microbiol. 2005 Apr;56(2):559-73. doi: 10.1111/j.1365-2958.2005.04562.x. Mol Microbiol. 2005. PMID: 15813744 Free article.

6

New signaling pathways govern the host response to C. albicans infection in various niches.

Liu Y, Shetty AC, Schwartz JA, Bradford LL, Xu W, Phan QT, Kumari P, Mahurkar A, Mitchell AP, Ravel J, Fraser CM, Filler SG, Bruno VM. Liu Y, et al. Among authors: bruno vm. Genome Res. 2015 May;25(5):679-89. doi: 10.1101/gr.187427.114. Epub 2015 Apr 9. Genome Res. 2015. PMID: 25858952 Free PMC article.

7

Genetic control of chlamydospore formation in Candida albicans.

Nobile CJ, Bruno VM, Richard ML, Davis DA, Mitchell AP. Nobile CJ, et al. Among authors: bruno vm. Microbiology (Reading). 2003 Dec;149(Pt 12):3629-3637. doi: 10.1099/mic.0.26640-0. Microbiology (Reading). 2003. PMID: 14663094 Free article.

8

Differential expression analysis for paired RNA-Seq data.

Chung LM, Ferguson JP, Zheng W, Qian F, Bruno V, Montgomery RR, Zhao H. Chung LM, et al. BMC Bioinformatics. 2013 Mar 27;14:110. doi: 10.1186/1471-2105-14-110. BMC Bioinformatics. 2013. PMID: 23530607 Free PMC article.

9

Best practices on the differential expression analysis of multi-species RNA-seq.

Chung M, Bruno VM, Rasko DA, Cuomo CA, Muñoz JF, Livny J, Shetty AC, Mahurkar A, Dunning Hotopp JC. Chung M, et al. Among authors: bruno vm. Genome Biol. 2021 Apr 29;22(1):121. doi: 10.1186/s13059-021-02337-8. Genome Biol. 2021. PMID: 33926528 Free PMC article. Review.

10

Large-scale gene function analysis in Candida albicans.

Bruno VM, Mitchell AP. Bruno VM, et al. Trends Microbiol. 2004 Apr;12(4):157-61. doi: 10.1016/j.tim.2004.02.002. Trends Microbiol. 2004. PMID: 15051065 No abstract available.

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