He S - Search Results

1

Validation of two ribosomal RNA removal methods for microbial metatranscriptomics.

He S, Wurtzel O, Singh K, Froula JL, Yilmaz S, Tringe SG, Wang Z, Chen F, Lindquist EA, Sorek R, Hugenholtz P. He S, et al. Nat Methods. 2010 Oct;7(10):807-12. doi: 10.1038/nmeth.1507. Epub 2010 Sep 19. Nat Methods. 2010. PMID: 20852648 Free article.

2

Patterns in wetland microbial community composition and functional gene repertoire associated with methane emissions.

He S, Malfatti SA, McFarland JW, Anderson FE, Pati A, Huntemann M, Tremblay J, Glavina del Rio T, Waldrop MP, Windham-Myers L, Tringe SG. He S, et al. mBio. 2015 May 19;6(3):e00066-15. doi: 10.1128/mBio.00066-15. mBio. 2015. PMID: 25991679 Free PMC article.

3

Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities.

García Martín H, Ivanova N, Kunin V, Warnecke F, Barry KW, McHardy AC, Yeates C, He S, Salamov AA, Szeto E, Dalin E, Putnam NH, Shapiro HJ, Pangilinan JL, Rigoutsos I, Kyrpides NC, Blackall LL, McMahon KD, Hugenholtz P. García Martín H, et al. Among authors: he s. Nat Biotechnol. 2006 Oct;24(10):1263-9. doi: 10.1038/nbt1247. Epub 2006 Sep 24. Nat Biotechnol. 2006. PMID: 16998472 Free article.

4

Comparative metagenomic and metatranscriptomic analysis of hindgut paunch microbiota in wood- and dung-feeding higher termites.

He S, Ivanova N, Kirton E, Allgaier M, Bergin C, Scheffrahn RH, Kyrpides NC, Warnecke F, Tringe SG, Hugenholtz P. He S, et al. PLoS One. 2013 Apr 12;8(4):e61126. doi: 10.1371/journal.pone.0061126. Print 2013. PLoS One. 2013. PMID: 23593407 Free PMC article.

5

Primer and platform effects on 16S rRNA tag sequencing.

Tremblay J, Singh K, Fern A, Kirton ES, He S, Woyke T, Lee J, Chen F, Dangl JL, Tringe SG. Tremblay J, et al. Among authors: he s. Front Microbiol. 2015 Aug 4;6:771. doi: 10.3389/fmicb.2015.00771. eCollection 2015. Front Microbiol. 2015. PMID: 26300854 Free PMC article.

6

Ecophysiology of Freshwater Verrucomicrobia Inferred from Metagenome-Assembled Genomes.

He S, Stevens SLR, Chan LK, Bertilsson S, Glavina Del Rio T, Tringe SG, Malmstrom RR, McMahon KD. He S, et al. mSphere. 2017 Sep 27;2(5):e00277-17. doi: 10.1128/mSphere.00277-17. eCollection 2017 Sep-Oct. mSphere. 2017. PMID: 28959738 Free PMC article.

7

Comparative genomics of two 'Candidatus Accumulibacter' clades performing biological phosphorus removal.

Flowers JJ, He S, Malfatti S, del Rio TG, Tringe SG, Hugenholtz P, McMahon KD. Flowers JJ, et al. Among authors: he s. ISME J. 2013 Dec;7(12):2301-14. doi: 10.1038/ismej.2013.117. Epub 2013 Jul 25. ISME J. 2013. PMID: 23887171 Free PMC article.

8

A bacterial metapopulation adapts locally to phage predation despite global dispersal.

Kunin V, He S, Warnecke F, Peterson SB, Garcia Martin H, Haynes M, Ivanova N, Blackall LL, Breitbart M, Rohwer F, McMahon KD, Hugenholtz P. Kunin V, et al. Among authors: he s. Genome Res. 2008 Feb;18(2):293-7. doi: 10.1101/gr.6835308. Epub 2007 Dec 12. Genome Res. 2008. PMID: 18077539 Free PMC article.

9

Metatranscriptomic array analysis of 'Candidatus Accumulibacter phosphatis'-enriched enhanced biological phosphorus removal sludge.

He S, Kunin V, Haynes M, Martin HG, Ivanova N, Rohwer F, Hugenholtz P, McMahon KD. He S, et al. Environ Microbiol. 2010 May;12(5):1205-17. doi: 10.1111/j.1462-2920.2010.02163.x. Epub 2010 Feb 9. Environ Microbiol. 2010. PMID: 20148930

10

Polyphosphate kinase genes from full-scale activated sludge plants.

McMahon KD, Yilmaz S, He S, Gall DL, Jenkins D, Keasling JD. McMahon KD, et al. Among authors: he s. Appl Microbiol Biotechnol. 2007 Nov;77(1):167-73. doi: 10.1007/s00253-007-1122-6. Epub 2007 Aug 2. Appl Microbiol Biotechnol. 2007. PMID: 17671784

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