Tsujii J - Search Results

1

Improving the inter-corpora compatibility for protein annotations.

Wang Y, Kim JD, Saetre R, Pyysalo S, Ohta T, Tsujii J. Wang Y, et al. Among authors: tsujii j. J Bioinform Comput Biol. 2010 Oct;8(5):901-16. doi: 10.1142/s0219720010004999. J Bioinform Comput Biol. 2010. PMID: 20981894

2

Investigating heterogeneous protein annotations toward cross-corpora utilization.

Wang Y, Kim JD, Saetre R, Pyysalo S, Tsujii J. Wang Y, et al. Among authors: tsujii j. BMC Bioinformatics. 2009 Dec 9;10:403. doi: 10.1186/1471-2105-10-403. BMC Bioinformatics. 2009. PMID: 19995463 Free PMC article.

3

Event extraction with complex event classification using rich features.

Miwa M, Saetre R, Kim JD, Tsujii J. Miwa M, et al. Among authors: tsujii j. J Bioinform Comput Biol. 2010 Feb;8(1):131-46. doi: 10.1142/s0219720010004586. J Bioinform Comput Biol. 2010. PMID: 20183879

4

Extracting protein interactions from text with the unified AkaneRE event extraction system.

Saetre R, Yoshida K, Miwa M, Matsuzaki T, Kano Y, Tsujii J. Saetre R, et al. Among authors: tsujii j. IEEE/ACM Trans Comput Biol Bioinform. 2010 Jul-Sep;7(3):442-53. doi: 10.1109/TCBB.2010.46. IEEE/ACM Trans Comput Biol Bioinform. 2010. PMID: 20671316

5

A re-evaluation of biomedical named entity-term relations.

Ohta T, Pyysalo S, Kim JD, Tsujii J. Ohta T, et al. Among authors: tsujii j. J Bioinform Comput Biol. 2010 Oct;8(5):917-28. doi: 10.1142/s0219720010005014. J Bioinform Comput Biol. 2010. PMID: 20981895

6

Improving protein coreference resolution by simple semantic classification.

Nguyen N, Kim JD, Miwa M, Matsuzaki T, Tsujii J. Nguyen N, et al. Among authors: tsujii j. BMC Bioinformatics. 2012 Nov 17;13:304. doi: 10.1186/1471-2105-13-304. BMC Bioinformatics. 2012. PMID: 23157272 Free PMC article.

7

Evaluating contributions of natural language parsers to protein-protein interaction extraction.

Miyao Y, Sagae K, Saetre R, Matsuzaki T, Tsujii J. Miyao Y, et al. Among authors: tsujii j. Bioinformatics. 2009 Feb 1;25(3):394-400. doi: 10.1093/bioinformatics/btn631. Epub 2008 Dec 9. Bioinformatics. 2009. PMID: 19073593 Free PMC article.

8

Protein-protein interaction extraction by leveraging multiple kernels and parsers.

Miwa M, Saetre R, Miyao Y, Tsujii J. Miwa M, et al. Among authors: tsujii j. Int J Med Inform. 2009 Dec;78(12):e39-46. doi: 10.1016/j.ijmedinf.2009.04.010. Epub 2009 Jun 4. Int J Med Inform. 2009. PMID: 19501018

9

An analysis of gene/protein associations at PubMed scale.

Pyysalo S, Ohta T, Tsujii J. Pyysalo S, et al. Among authors: tsujii j. J Biomed Semantics. 2011 Oct 6;2 Suppl 5(Suppl 5):S5. doi: 10.1186/2041-1480-2-S5-S5. J Biomed Semantics. 2011. PMID: 22166173 Free PMC article.

10

Event extraction for DNA methylation.

Ohta T, Pyysalo S, Miwa M, Tsujii J. Ohta T, et al. Among authors: tsujii j. J Biomed Semantics. 2011 Oct 6;2 Suppl 5(Suppl 5):S2. doi: 10.1186/2041-1480-2-S5-S2. J Biomed Semantics. 2011. PMID: 22166595 Free PMC article.

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