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Identification of functional elements and regulatory circuits by Drosophila modENCODE.
modENCODE Consortium; Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, Robine N, Washington NL, Di Stefano L, Berezikov E, Brown CD, Candeias R, Carlson JW, Carr A, Jungreis I, Marbach D, Sealfon R, Tolstorukov MY, Will S, Alekseyenko AA, Artieri C, Booth BW, Brooks AN, Dai Q, Davis CA, Duff MO, Feng X, Gorchakov AA, Gu T, Henikoff JG, Kapranov P, Li R, MacAlpine HK, Malone J, Minoda A, Nordman J, Okamura K, Perry M, Powell SK, Riddle NC, Sakai A, Samsonova A, Sandler JE, Schwartz YB, Sher N, Spokony R, Sturgill D, van Baren M, Wan KH, Yang L, Yu C, Feingold E, Good P, Guyer M, Lowdon R, Ahmad K, Andrews J, Berger B, Brenner SE, Brent MR, Cherbas L, Elgin SC, Gingeras TR, Grossman R, Hoskins RA, Kaufman TC, Kent W, Kuroda MI, Orr-Weaver T, Perrimon N, Pirrotta V, Posakony JW, Ren B, Russell S, Cherbas P, Graveley BR, Lewis S, Micklem G, Oliver B, Park PJ, Celniker SE, Henikoff S, Karpen GH, Lai EC, MacAlpine DM, Stein LD, White KP, Kellis M. modENCODE Consortium, et al. Among authors: schwartz yb. Science. 2010 Dec 24;330(6012):1787-97. doi: 10.1126/science.1198374. Epub 2010 Dec 22. Science. 2010. PMID: 21177974 Free PMC article.
Polycomb silencing blocks transcription initiation.
Dellino GI, Schwartz YB, Farkas G, McCabe D, Elgin SC, Pirrotta V. Dellino GI, et al. Among authors: schwartz yb. Mol Cell. 2004 Mar 26;13(6):887-93. doi: 10.1016/s1097-2765(04)00128-5. Mol Cell. 2004. PMID: 15053881 Free article.
Polycomb complexes and epigenetic states.
Schwartz YB, Pirrotta V. Schwartz YB, et al. Curr Opin Cell Biol. 2008 Jun;20(3):266-73. doi: 10.1016/j.ceb.2008.03.002. Epub 2008 Apr 23. Curr Opin Cell Biol. 2008. PMID: 18439810 Review.
A little bit of sugar makes polycomb better.
Schwartz YB, Pirrotta V. Schwartz YB, et al. J Mol Cell Biol. 2009 Oct;1(1):11-2. doi: 10.1093/jmcb/mjp008. Epub 2009 Aug 11. J Mol Cell Biol. 2009. PMID: 19671629
An assessment of histone-modification antibody quality.
Egelhofer TA, Minoda A, Klugman S, Lee K, Kolasinska-Zwierz P, Alekseyenko AA, Cheung MS, Day DS, Gadel S, Gorchakov AA, Gu T, Kharchenko PV, Kuan S, Latorre I, Linder-Basso D, Luu Y, Ngo Q, Perry M, Rechtsteiner A, Riddle NC, Schwartz YB, Shanower GA, Vielle A, Ahringer J, Elgin SC, Kuroda MI, Pirrotta V, Ren B, Strome S, Park PJ, Karpen GH, Hawkins RD, Lieb JD. Egelhofer TA, et al. Among authors: schwartz yb. Nat Struct Mol Biol. 2011 Jan;18(1):91-3. doi: 10.1038/nsmb.1972. Epub 2010 Dec 5. Nat Struct Mol Biol. 2011. PMID: 21131980 Free PMC article.
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