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Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project.
Gerstein MB, Lu ZJ, Van Nostrand EL, Cheng C, Arshinoff BI, Liu T, Yip KY, Robilotto R, Rechtsteiner A, Ikegami K, Alves P, Chateigner A, Perry M, Morris M, Auerbach RK, Feng X, Leng J, Vielle A, Niu W, Rhrissorrakrai K, Agarwal A, Alexander RP, Barber G, Brdlik CM, Brennan J, Brouillet JJ, Carr A, Cheung MS, Clawson H, Contrino S, Dannenberg LO, Dernburg AF, Desai A, Dick L, Dosé AC, Du J, Egelhofer T, Ercan S, Euskirchen G, Ewing B, Feingold EA, Gassmann R, Good PJ, Green P, Gullier F, Gutwein M, Guyer MS, Habegger L, Han T, Henikoff JG, Henz SR, Hinrichs A, Holster H, Hyman T, Iniguez AL, Janette J, Jensen M, Kato M, Kent WJ, Kephart E, Khivansara V, Khurana E, Kim JK, Kolasinska-Zwierz P, Lai EC, Latorre I, Leahey A, Lewis S, Lloyd P, Lochovsky L, Lowdon RF, Lubling Y, Lyne R, MacCoss M, Mackowiak SD, Mangone M, McKay S, Mecenas D, Merrihew G, Miller DM 3rd, Muroyama A, Murray JI, Ooi SL, Pham H, Phippen T, Preston EA, Rajewsky N, Rätsch G, Rosenbaum H, Rozowsky J, Rutherford K, Ruzanov P, Sarov M, Sasidharan R, Sboner A, Scheid P, Segal E, Shin H, Shou C, Slack FJ, Slightam C, Smith R, Spencer WC, Stinson EO, Taing S, Takasaki T, Vafeados D, Voronina K, Wang G, Washing… See abstract for full author list ➔ Gerstein MB, et al. Among authors: rhrissorrakrai k. Science. 2010 Dec 24;330(6012):1775-87. doi: 10.1126/science.1196914. Epub 2010 Dec 22. Science. 2010. PMID: 21177976 Free PMC article.
MINE: Module Identification in Networks.
Rhrissorrakrai K, Gunsalus KC. Rhrissorrakrai K, et al. BMC Bioinformatics. 2011 May 23;12:192. doi: 10.1186/1471-2105-12-192. BMC Bioinformatics. 2011. PMID: 21605434 Free PMC article.
Networks in Caenorhabditis elegans.
Gunsalus KC, Rhrissorrakrai K. Gunsalus KC, et al. Among authors: rhrissorrakrai k. Curr Opin Genet Dev. 2011 Dec;21(6):787-98. doi: 10.1016/j.gde.2011.10.003. Epub 2011 Nov 4. Curr Opin Genet Dev. 2011. PMID: 22054717 Review.
Erratum to: MINE: Module Identification in Networks.
Rhrissorrakrai K, Gunsalus KC. Rhrissorrakrai K, et al. BMC Bioinformatics. 2016 Feb 17;17:89. doi: 10.1186/s12859-016-0929-5. BMC Bioinformatics. 2016. PMID: 26887572 Free PMC article. No abstract available.
A protein domain-based interactome network for C. elegans early embryogenesis.
Boxem M, Maliga Z, Klitgord N, Li N, Lemmens I, Mana M, de Lichtervelde L, Mul JD, van de Peut D, Devos M, Simonis N, Yildirim MA, Cokol M, Kao HL, de Smet AS, Wang H, Schlaitz AL, Hao T, Milstein S, Fan C, Tipsword M, Drew K, Galli M, Rhrissorrakrai K, Drechsel D, Koller D, Roth FP, Iakoucheva LM, Dunker AK, Bonneau R, Gunsalus KC, Hill DE, Piano F, Tavernier J, van den Heuvel S, Hyman AA, Vidal M. Boxem M, et al. Among authors: rhrissorrakrai k. Cell. 2008 Aug 8;134(3):534-45. doi: 10.1016/j.cell.2008.07.009. Cell. 2008. PMID: 18692475 Free PMC article.
A crowd-sourcing approach for the construction of species-specific cell signaling networks.
Bilal E, Sakellaropoulos T, Melas IN, Messinis DE, Belcastro V, Rhrissorrakrai K, Meyer P, Norel R, Iskandar A, Blaese E, Rice JJ, Peitsch MC, Hoeng J, Stolovitzky G, Alexopoulos LG, Poussin C; Challenge Participants. Bilal E, et al. Among authors: rhrissorrakrai k. Bioinformatics. 2015 Feb 15;31(4):484-91. doi: 10.1093/bioinformatics/btu659. Epub 2014 Oct 7. Bioinformatics. 2015. PMID: 25294919 Free PMC article.
37 results