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Dalliance: interactive genome viewing on the web.
Down TA, Piipari M, Hubbard TJ. Down TA, et al. Among authors: hubbard tj. Bioinformatics. 2011 Mar 15;27(6):889-90. doi: 10.1093/bioinformatics/btr020. Epub 2011 Jan 19. Bioinformatics. 2011. PMID: 21252075 Free PMC article.
An interactive genome browser of association results from the UK10K cohorts project.
Geihs M, Yan Y, Walter K, Huang J, Memari Y, Min JL, Mead D; UK10K Consortium; Hubbard TJ, Timpson NJ, Down TA, Soranzo N. Geihs M, et al. Among authors: hubbard tj. Bioinformatics. 2015 Dec 15;31(24):4029-31. doi: 10.1093/bioinformatics/btv491. Epub 2015 Aug 26. Bioinformatics. 2015. PMID: 26315906 Free PMC article.
Integrating sequence and structural biology with DAS.
Prlić A, Down TA, Kulesha E, Finn RD, Kähäri A, Hubbard TJ. Prlić A, et al. Among authors: hubbard tj. BMC Bioinformatics. 2007 Sep 12;8:333. doi: 10.1186/1471-2105-8-333. BMC Bioinformatics. 2007. PMID: 17850653 Free PMC article.
Adding some SPICE to DAS.
Prlić A, Down TA, Hubbard TJ. Prlić A, et al. Among authors: hubbard tj. Bioinformatics. 2005 Sep 1;21 Suppl 2(Suppl 2):ii40-1. doi: 10.1093/bioinformatics/bti1106. Bioinformatics. 2005. PMID: 16204122 Free PMC article.
Ensembl 2008.
Flicek P, Aken BL, Beal K, Ballester B, Caccamo M, Chen Y, Clarke L, Coates G, Cunningham F, Cutts T, Down T, Dyer SC, Eyre T, Fitzgerald S, Fernandez-Banet J, Gräf S, Haider S, Hammond M, Holland R, Howe KL, Howe K, Johnson N, Jenkinson A, Kähäri A, Keefe D, Kokocinski F, Kulesha E, Lawson D, Longden I, Megy K, Meidl P, Overduin B, Parker A, Pritchard B, Prlic A, Rice S, Rios D, Schuster M, Sealy I, Slater G, Smedley D, Spudich G, Trevanion S, Vilella AJ, Vogel J, White S, Wood M, Birney E, Cox T, Curwen V, Durbin R, Fernandez-Suarez XM, Herrero J, Hubbard TJ, Kasprzyk A, Proctor G, Smith J, Ureta-Vidal A, Searle S. Flicek P, et al. Among authors: hubbard tj. Nucleic Acids Res. 2008 Jan;36(Database issue):D707-14. doi: 10.1093/nar/gkm988. Epub 2007 Nov 13. Nucleic Acids Res. 2008. PMID: 18000006 Free PMC article.
An overview of Ensembl.
Birney E, Andrews TD, Bevan P, Caccamo M, Chen Y, Clarke L, Coates G, Cuff J, Curwen V, Cutts T, Down T, Eyras E, Fernandez-Suarez XM, Gane P, Gibbins B, Gilbert J, Hammond M, Hotz HR, Iyer V, Jekosch K, Kahari A, Kasprzyk A, Keefe D, Keenan S, Lehvaslaiho H, McVicker G, Melsopp C, Meidl P, Mongin E, Pettett R, Potter S, Proctor G, Rae M, Searle S, Slater G, Smedley D, Smith J, Spooner W, Stabenau A, Stalker J, Storey R, Ureta-Vidal A, Woodwark KC, Cameron G, Durbin R, Cox A, Hubbard T, Clamp M. Birney E, et al. Genome Res. 2004 May;14(5):925-8. doi: 10.1101/gr.1860604. Epub 2004 Apr 12. Genome Res. 2004. PMID: 15078858 Free PMC article. Review.
NestedMICA as an ab initio protein motif discovery tool.
Doğruel M, Down TA, Hubbard TJ. Doğruel M, et al. Among authors: hubbard tj. BMC Bioinformatics. 2008 Jan 14;9:19. doi: 10.1186/1471-2105-9-19. BMC Bioinformatics. 2008. PMID: 18194537 Free PMC article.
Integrating biological data--the Distributed Annotation System.
Jenkinson AM, Albrecht M, Birney E, Blankenburg H, Down T, Finn RD, Hermjakob H, Hubbard TJ, Jimenez RC, Jones P, Kähäri A, Kulesha E, Macías JR, Reeves GA, Prlić A. Jenkinson AM, et al. Among authors: hubbard tj. BMC Bioinformatics. 2008 Jul 22;9 Suppl 8(Suppl 8):S3. doi: 10.1186/1471-2105-9-S8-S3. BMC Bioinformatics. 2008. PMID: 18673527 Free PMC article.
273 results