Stegle O - Search Results

1

Joint genetic analysis of gene expression data with inferred cellular phenotypes.

Parts L, Stegle O, Winn J, Durbin R. Parts L, et al. Among authors: stegle o. PLoS Genet. 2011 Jan 20;7(1):e1001276. doi: 10.1371/journal.pgen.1001276. PLoS Genet. 2011. PMID: 21283789 Free PMC article.

2

A Bayesian framework to account for complex non-genetic factors in gene expression levels greatly increases power in eQTL studies.

Stegle O, Parts L, Durbin R, Winn J. Stegle O, et al. PLoS Comput Biol. 2010 May 6;6(5):e1000770. doi: 10.1371/journal.pcbi.1000770. PLoS Comput Biol. 2010. PMID: 20463871 Free PMC article.

3

Joint modelling of confounding factors and prominent genetic regulators provides increased accuracy in genetical genomics studies.

Fusi N, Stegle O, Lawrence ND. Fusi N, et al. Among authors: stegle o. PLoS Comput Biol. 2012 Jan;8(1):e1002330. doi: 10.1371/journal.pcbi.1002330. Epub 2012 Jan 5. PLoS Comput Biol. 2012. PMID: 22241974 Free PMC article.

4

ShapePheno: unsupervised extraction of shape phenotypes from biological image collections.

Karaletsos T, Stegle O, Dreyer C, Winn J, Borgwardt KM. Karaletsos T, et al. Among authors: stegle o. Bioinformatics. 2012 Apr 1;28(7):1001-8. doi: 10.1093/bioinformatics/bts081. Epub 2012 Feb 13. Bioinformatics. 2012. PMID: 22333244

5

Using probabilistic estimation of expression residuals (PEER) to obtain increased power and interpretability of gene expression analyses.

Stegle O, Parts L, Piipari M, Winn J, Durbin R. Stegle O, et al. Nat Protoc. 2012 Feb 16;7(3):500-7. doi: 10.1038/nprot.2011.457. Nat Protoc. 2012. PMID: 22343431 Free PMC article.

6

Patterns of cis regulatory variation in diverse human populations.

Stranger BE, Montgomery SB, Dimas AS, Parts L, Stegle O, Ingle CE, Sekowska M, Smith GD, Evans D, Gutierrez-Arcelus M, Price A, Raj T, Nisbett J, Nica AC, Beazley C, Durbin R, Deloukas P, Dermitzakis ET. Stranger BE, et al. Among authors: stegle o. PLoS Genet. 2012;8(4):e1002639. doi: 10.1371/journal.pgen.1002639. Epub 2012 Apr 19. PLoS Genet. 2012. PMID: 22532805 Free PMC article.

7

Personalized medicine: from genotypes and molecular phenotypes towards therapy- session introduction.

Listgarten J, Stegle O, Morris Q, Brenner SE, Parts L. Listgarten J, et al. Among authors: stegle o. Pac Symp Biocomput. 2014;19:224-8. doi: 10.1142/9789814583220_0022. Pac Symp Biocomput. 2014. PMID: 24297549 Free PMC article. No abstract available.

8

Personalized medicine: from genotypes, molecular phenotypes and the quantified self, towards improved medicine.

Dudley JT, Listgarten J, Stegle O, Brenner SE, Parts L. Dudley JT, et al. Among authors: stegle o. Pac Symp Biocomput. 2015:342-6. Pac Symp Biocomput. 2015. PMID: 25592594 Free PMC article.

9

A global reference for human genetic variation.

1000 Genomes Project Consortium; Auton A, Brooks LD, Durbin RM, Garrison EP, Kang HM, Korbel JO, Marchini JL, McCarthy S, McVean GA, Abecasis GR. 1000 Genomes Project Consortium, et al. Nature. 2015 Oct 1;526(7571):68-74. doi: 10.1038/nature15393. Nature. 2015. PMID: 26432245 Free PMC article.

10

A high-content platform to characterise human induced pluripotent stem cell lines.

Leha A, Moens N, Meleckyte R, Culley OJ, Gervasio MK, Kerz M, Reimer A, Cain SA, Streeter I, Folarin A, Stegle O, Kielty CM; HipSci Consortium; Durbin R, Watt FM, Danovi D. Leha A, et al. Among authors: stegle o. Methods. 2016 Mar 1;96:85-96. doi: 10.1016/j.ymeth.2015.11.012. Epub 2015 Nov 25. Methods. 2016. PMID: 26608109 Free PMC article.

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