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Meeting Report from the Second "Minimum Information for Biological and Biomedical Investigations" (MIBBI) workshop.
Kettner C, Field D, Sansone SA, Taylor C, Aerts J, Binns N, Blake A, Britten CM, de Marco A, Fostel J, Gaudet P, González-Beltrán A, Hardy N, Hellemans J, Hermjakob H, Juty N, Leebens-Mack J, Maguire E, Neumann S, Orchard S, Parkinson H, Piel W, Ranganathan S, Rocca-Serra P, Santarsiero A, Shotton D, Sterk P, Untergasser A, Whetzel PL. Kettner C, et al. Among authors: juty n. Stand Genomic Sci. 2010 Dec 25;3(3):259-66. doi: 10.4056/sigs.147362. Stand Genomic Sci. 2010. PMID: 21304730 Free PMC article.
Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data.
McMurry JA, Juty N, Blomberg N, Burdett T, Conlin T, Conte N, Courtot M, Deck J, Dumontier M, Fellows DK, Gonzalez-Beltran A, Gormanns P, Grethe J, Hastings J, Hériché JK, Hermjakob H, Ison JC, Jimenez RC, Jupp S, Kunze J, Laibe C, Le Novère N, Malone J, Martin MJ, McEntyre JR, Morris C, Muilu J, Müller W, Rocca-Serra P, Sansone SA, Sariyar M, Snoep JL, Soiland-Reyes S, Stanford NJ, Swainston N, Washington N, Williams AR, Wimalaratne SM, Winfree LM, Wolstencroft K, Goble C, Mungall CJ, Haendel MA, Parkinson H. McMurry JA, et al. Among authors: juty n. PLoS Biol. 2017 Jun 29;15(6):e2001414. doi: 10.1371/journal.pbio.2001414. eCollection 2017 Jun. PLoS Biol. 2017. PMID: 28662064 Free PMC article.
Identifiers.org: Compact Identifier services in the cloud.
Bernal-Llinares M, Ferrer-Gómez J, Juty N, Goble C, Wimalaratne SM, Hermjakob H. Bernal-Llinares M, et al. Among authors: juty n. Bioinformatics. 2021 Jul 19;37(12):1781-1782. doi: 10.1093/bioinformatics/btaa864. Bioinformatics. 2021. PMID: 33031499 Free PMC article.
Features of a FAIR vocabulary.
Xu F, Juty N, Goble C, Jupp S, Parkinson H, Courtot M. Xu F, et al. Among authors: juty n. J Biomed Semantics. 2023 Jun 1;14(1):6. doi: 10.1186/s13326-023-00286-8. J Biomed Semantics. 2023. PMID: 37264430 Free PMC article.
SPARQL-enabled identifier conversion with Identifiers.org.
Wimalaratne SM, Bolleman J, Juty N, Katayama T, Dumontier M, Redaschi N, Le Novère N, Hermjakob H, Laibe C. Wimalaratne SM, et al. Among authors: juty n. Bioinformatics. 2015 Jun 1;31(11):1875-7. doi: 10.1093/bioinformatics/btv064. Epub 2015 Jan 31. Bioinformatics. 2015. PMID: 25638809 Free PMC article.
The health care and life sciences community profile for dataset descriptions.
Dumontier M, Gray AJG, Marshall MS, Alexiev V, Ansell P, Bader G, Baran J, Bolleman JT, Callahan A, Cruz-Toledo J, Gaudet P, Gombocz EA, Gonzalez-Beltran AN, Groth P, Haendel M, Ito M, Jupp S, Juty N, Katayama T, Kobayashi N, Krishnaswami K, Laibe C, Le Novère N, Lin S, Malone J, Miller M, Mungall CJ, Rietveld L, Wimalaratne SM, Yamaguchi A. Dumontier M, et al. Among authors: juty n. PeerJ. 2016 Aug 16;4:e2331. doi: 10.7717/peerj.2331. eCollection 2016. PeerJ. 2016. PMID: 27602295 Free PMC article.
Correction to: Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE).
Waltemath D, Bergmann FT, Chaouiya C, Czauderna T, Gleeson P, Goble C, Golebiewski M, Hucka M, Juty N, Krebs O, Le Novère N, Mi H, Moraru II, Myers CJ, Nickerson D, Olivier BG, Rodriguez N, Schreiber F, Smith L, Zhang F, Bonnet E. Waltemath D, et al. Among authors: juty n. Stand Genomic Sci. 2018 Aug 9;13:17. doi: 10.1186/s40793-018-0320-4. eCollection 2018. Stand Genomic Sci. 2018. PMID: 30117501 Free PMC article.
Uniform resolution of compact identifiers for biomedical data.
Wimalaratne SM, Juty N, Kunze J, Janée G, McMurry JA, Beard N, Jimenez R, Grethe JS, Hermjakob H, Martone ME, Clark T. Wimalaratne SM, et al. Among authors: juty n. Sci Data. 2018 May 8;5:180029. doi: 10.1038/sdata.2018.29. Sci Data. 2018. PMID: 29737976 Free PMC article.
The evolution of standards and data management practices in systems biology.
Stanford NJ, Wolstencroft K, Golebiewski M, Kania R, Juty N, Tomlinson C, Owen S, Butcher S, Hermjakob H, Le Novère N, Mueller W, Snoep J, Goble C. Stanford NJ, et al. Among authors: juty n. Mol Syst Biol. 2015 Dec 23;11(12):851. doi: 10.15252/msb.20156053. Mol Syst Biol. 2015. PMID: 26700851 Free PMC article.
34 results