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2,114 results

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Analyzing and visualizing residue networks of protein structures.
Doncheva NT, Klein K, Domingues FS, Albrecht M. Doncheva NT, et al. Among authors: klein k. Trends Biochem Sci. 2011 Apr;36(4):179-82. doi: 10.1016/j.tibs.2011.01.002. Epub 2011 Feb 21. Trends Biochem Sci. 2011. PMID: 21345680
Integrative visual analysis of protein sequence mutations.
Doncheva NT, Klein K, Morris JH, Wybrow M, Domingues FS, Albrecht M. Doncheva NT, et al. Among authors: klein k. BMC Proc. 2014 Aug 28;8(Suppl 2 Proceedings of the 3rd Annual Symposium on Biologica):S2. doi: 10.1186/1753-6561-8-S2-S2. eCollection 2014. BMC Proc. 2014. PMID: 25237389 Free PMC article.
Interactive exploration of chemical space with Scaffold Hunter.
Wetzel S, Klein K, Renner S, Rauh D, Oprea TI, Mutzel P, Waldmann H. Wetzel S, et al. Among authors: klein k. Nat Chem Biol. 2009 Aug;5(8):581-3. doi: 10.1038/nchembio.187. Epub 2009 Jun 28. Nat Chem Biol. 2009. PMID: 19561620
Visualization and analysis of RNA-Seq assembly graphs.
Nazarie FW, Shih B, Angus T, Barnett MW, Chen SH, Summers KM, Klein K, Faulkner GJ, Saini HK, Watson M, Dongen SV, Enright AJ, Freeman TC. Nazarie FW, et al. Among authors: klein k. Nucleic Acids Res. 2019 Aug 22;47(14):7262-7275. doi: 10.1093/nar/gkz599. Nucleic Acids Res. 2019. PMID: 31305886 Free PMC article.
Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches.
Niarakis A, Ostaszewski M, Mazein A, Kuperstein I, Kutmon M, Gillespie ME, Funahashi A, Acencio ML, Hemedan A, Aichem M, Klein K, Czauderna T, Burtscher F, Yamada TG, Hiki Y, Hiroi NF, Hu F, Pham N, Ehrhart F, Willighagen EL, Valdeolivas A, Dugourd A, Messina F, Esteban-Medina M, Peña-Chilet M, Rian K, Soliman S, Aghamiri SS, Puniya BL, Naldi A, Helikar T, Singh V, Fernández MF, Bermudez V, Tsirvouli E, Montagud A, Noël V, Ponce-de-Leon M, Maier D, Bauch A, Gyori BM, Bachman JA, Luna A, Piñero J, Furlong LI, Balaur I, Rougny A, Jarosz Y, Overall RW, Phair R, Perfetto L, Matthews L, Rex DAB, Orlic-Milacic M, Gomez LCM, De Meulder B, Ravel JM, Jassal B, Satagopam V, Wu G, Golebiewski M, Gawron P, Calzone L, Beckmann JS, Evelo CT, D'Eustachio P, Schreiber F, Saez-Rodriguez J, Dopazo J, Kuiper M, Valencia A, Wolkenhauer O, Kitano H, Barillot E, Auffray C, Balling R, Schneider R; COVID-19 Disease Map Community. Niarakis A, et al. Among authors: klein k. Front Immunol. 2024 Feb 13;14:1282859. doi: 10.3389/fimmu.2023.1282859. eCollection 2023. Front Immunol. 2024. PMID: 38414974 Free PMC article.
Health monitoring in birds using bio-loggers and whole blood transcriptomics.
Jax E, Müller I, Börno S, Borlinghaus H, Eriksson G, Fricke E, Timmermann B, Pendl H, Fiedler W, Klein K, Schreiber F, Wikelski M, Magor KE, Kraus RHS. Jax E, et al. Among authors: klein k. Sci Rep. 2021 May 24;11(1):10815. doi: 10.1038/s41598-021-90212-8. Sci Rep. 2021. PMID: 34031452 Free PMC article.
Visual Comparison of Networks in VR.
Joos L, Jaeger-Honz S, Schreiber F, Keim DA, Klein K. Joos L, et al. Among authors: klein k. IEEE Trans Vis Comput Graph. 2022 Nov;28(11):3651-3661. doi: 10.1109/TVCG.2022.3203001. Epub 2022 Oct 21. IEEE Trans Vis Comput Graph. 2022. PMID: 36048995
2,114 results