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Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering.
J Biotechnol. 2011 Apr 20;153(1-2):62-75. doi: 10.1016/j.jbiotec.2011.02.011. Epub 2011 Mar 30.
J Biotechnol. 2011.
PMID: 21392545
Free PMC article.
Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming.
Blom J, Jakobi T, Doppmeier D, Jaenicke S, Kalinowski J, Stoye J, Goesmann A.
Blom J, et al. Among authors: doppmeier d.
Bioinformatics. 2011 May 15;27(10):1351-8. doi: 10.1093/bioinformatics/btr151. Epub 2011 Mar 30.
Bioinformatics. 2011.
PMID: 21450712
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EDGAR: a software framework for the comparative analysis of prokaryotic genomes.
Blom J, Albaum SP, Doppmeier D, Pühler A, Vorhölter FJ, Zakrzewski M, Goesmann A.
Blom J, et al. Among authors: doppmeier d.
BMC Bioinformatics. 2009 May 20;10:154. doi: 10.1186/1471-2105-10-154.
BMC Bioinformatics. 2009.
PMID: 19457249
Free PMC article.
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ReadXplorer--visualization and analysis of mapped sequences.
Hilker R, Stadermann KB, Doppmeier D, Kalinowski J, Stoye J, Straube J, Winnebald J, Goesmann A.
Hilker R, et al. Among authors: doppmeier d.
Bioinformatics. 2014 Aug 15;30(16):2247-54. doi: 10.1093/bioinformatics/btu205. Epub 2014 Apr 30.
Bioinformatics. 2014.
PMID: 24790157
Free PMC article.
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