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Distinct patterns of somatic alterations in a lymphoblastoid and a tumor genome derived from the same individual.
Galante PA, Parmigiani RB, Zhao Q, Caballero OL, de Souza JE, Navarro FC, Gerber AL, Nicolás MF, Salim AC, Silva AP, Edsall L, Devalle S, Almeida LG, Ye Z, Kuan S, Pinheiro DG, Tojal I, Pedigoni RG, de Sousa RG, Oliveira TY, de Paula MG, Ohno-Machado L, Kirkness EF, Levy S, da Silva WA Jr, Vasconcelos AT, Ren B, Zago MA, Strausberg RL, Simpson AJ, de Souza SJ, Camargo AA. Galante PA, et al. Among authors: levy s. Nucleic Acids Res. 2011 Aug;39(14):6056-68. doi: 10.1093/nar/gkr221. Epub 2011 Apr 14. Nucleic Acids Res. 2011. PMID: 21493686 Free PMC article.
Systematic detection of putative tumor suppressor genes through the combined use of exome and transcriptome sequencing.
Zhao Q, Kirkness EF, Caballero OL, Galante PA, Parmigiani RB, Edsall L, Kuan S, Ye Z, Levy S, Vasconcelos AT, Ren B, de Souza SJ, Camargo AA, Simpson AJ, Strausberg RL. Zhao Q, et al. Among authors: levy s. Genome Biol. 2010;11(11):R114. doi: 10.1186/gb-2010-11-11-r114. Epub 2010 Nov 25. Genome Biol. 2010. PMID: 21108794 Free PMC article.
Promoting transcriptome diversity.
Strausberg RL, Levy S. Strausberg RL, et al. Among authors: levy s. Genome Res. 2007 Jul;17(7):965-8. doi: 10.1101/gr.6499807. Genome Res. 2007. PMID: 17606983 Free article.
Human genetics: Individual genomes diversify.
Levy S, Strausberg RL. Levy S, et al. Nature. 2008 Nov 6;456(7218):49-51. doi: 10.1038/456049a. Nature. 2008. PMID: 18987731 No abstract available.
Transcriptome-guided characterization of genomic rearrangements in a breast cancer cell line.
Zhao Q, Caballero OL, Levy S, Stevenson BJ, Iseli C, de Souza SJ, Galante PA, Busam D, Leversha MA, Chadalavada K, Rogers YH, Venter JC, Simpson AJ, Strausberg RL. Zhao Q, et al. Among authors: levy s. Proc Natl Acad Sci U S A. 2009 Feb 10;106(6):1886-91. doi: 10.1073/pnas.0812945106. Epub 2009 Jan 30. Proc Natl Acad Sci U S A. 2009. PMID: 19181860 Free PMC article.
The HuRef Browser: a web resource for individual human genomics.
Axelrod N, Lin Y, Ng PC, Stockwell TB, Crabtree J, Huang J, Kirkness E, Strausberg RL, Frazier ME, Venter JC, Kravitz S, Levy S. Axelrod N, et al. Among authors: levy s. Nucleic Acids Res. 2009 Jan;37(Database issue):D1018-24. doi: 10.1093/nar/gkn939. Epub 2008 Nov 26. Nucleic Acids Res. 2009. PMID: 19036787 Free PMC article.
Emerging DNA sequencing technologies for human genomic medicine.
Strausberg RL, Levy S, Rogers YH. Strausberg RL, et al. Among authors: levy s. Drug Discov Today. 2008 Jul;13(13-14):569-77. doi: 10.1016/j.drudis.2008.03.025. Epub 2008 May 22. Drug Discov Today. 2008. PMID: 18598911 Review.
Towards a comprehensive structural variation map of an individual human genome.
Pang AW, MacDonald JR, Pinto D, Wei J, Rafiq MA, Conrad DF, Park H, Hurles ME, Lee C, Venter JC, Kirkness EF, Levy S, Feuk L, Scherer SW. Pang AW, et al. Among authors: levy s. Genome Biol. 2010;11(5):R52. doi: 10.1186/gb-2010-11-5-r52. Epub 2010 May 19. Genome Biol. 2010. PMID: 20482838 Free PMC article.
The diploid genome sequence of an individual human.
Levy S, Sutton G, Ng PC, Feuk L, Halpern AL, Walenz BP, Axelrod N, Huang J, Kirkness EF, Denisov G, Lin Y, MacDonald JR, Pang AW, Shago M, Stockwell TB, Tsiamouri A, Bafna V, Bansal V, Kravitz SA, Busam DA, Beeson KY, McIntosh TC, Remington KA, Abril JF, Gill J, Borman J, Rogers YH, Frazier ME, Scherer SW, Strausberg RL, Venter JC. Levy S, et al. PLoS Biol. 2007 Sep 4;5(10):e254. doi: 10.1371/journal.pbio.0050254. PLoS Biol. 2007. PMID: 17803354 Free PMC article.
Genetic variation in an individual human exome.
Ng PC, Levy S, Huang J, Stockwell TB, Walenz BP, Li K, Axelrod N, Busam DA, Strausberg RL, Venter JC. Ng PC, et al. Among authors: levy s. PLoS Genet. 2008 Aug 15;4(8):e1000160. doi: 10.1371/journal.pgen.1000160. PLoS Genet. 2008. PMID: 18704161 Free PMC article.
3,260 results