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The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside.
Luciano JS, Andersson B, Batchelor C, Bodenreider O, Clark T, Denney CK, Domarew C, Gambet T, Harland L, Jentzsch A, Kashyap V, Kos P, Kozlovsky J, Lebo T, Marshall SM, McCusker JP, McGuinness DL, Ogbuji C, Pichler E, Powers RL, Prud'hommeaux E, Samwald M, Schriml L, Tonellato PJ, Whetzel PL, Zhao J, Stephens S, Dumontier M. Luciano JS, et al. Among authors: batchelor c. J Biomed Semantics. 2011 May 17;2 Suppl 2(Suppl 2):S1. doi: 10.1186/2041-1480-2-S2-S1. J Biomed Semantics. 2011. PMID: 21624155 Free PMC article.
Structure-based classification and ontology in chemistry.
Hastings J, Magka D, Batchelor C, Duan L, Stevens R, Ennis M, Steinbeck C. Hastings J, et al. Among authors: batchelor c. J Cheminform. 2012 Apr 5;4:8. doi: 10.1186/1758-2946-4-8. J Cheminform. 2012. PMID: 22480202 Free PMC article.
Dovetailing biology and chemistry: integrating the Gene Ontology with the ChEBI chemical ontology.
Hill DP, Adams N, Bada M, Batchelor C, Berardini TZ, Dietze H, Drabkin HJ, Ennis M, Foulger RE, Harris MA, Hastings J, Kale NS, de Matos P, Mungall CJ, Owen G, Roncaglia P, Steinbeck C, Turner S, Lomax J. Hill DP, et al. Among authors: batchelor c. BMC Genomics. 2013 Jul 29;14:513. doi: 10.1186/1471-2164-14-513. BMC Genomics. 2013. PMID: 23895341 Free PMC article.
Evolution of the Sequence Ontology terms and relationships.
Mungall CJ, Batchelor C, Eilbeck K. Mungall CJ, et al. Among authors: batchelor c. J Biomed Inform. 2011 Feb;44(1):87-93. doi: 10.1016/j.jbi.2010.03.002. Epub 2010 Mar 10. J Biomed Inform. 2011. PMID: 20226267 Free PMC article.
A standard variation file format for human genome sequences.
Reese MG, Moore B, Batchelor C, Salas F, Cunningham F, Marth GT, Stein L, Flicek P, Yandell M, Eilbeck K. Reese MG, et al. Among authors: batchelor c. Genome Biol. 2010;11(8):R88. doi: 10.1186/gb-2010-11-8-r88. Epub 2010 Aug 26. Genome Biol. 2010. PMID: 20796305 Free PMC article.
Proteomic characterization of acute kidney injury in patients hospitalized with SARS-CoV2 infection.
Paranjpe I, Jayaraman P, Su CY, Zhou S, Chen S, Thompson R, Del Valle DM, Kenigsberg E, Zhao S, Jaladanki S, Chaudhary K, Ascolillo S, Vaid A, Gonzalez-Kozlova E, Kauffman J, Kumar A, Paranjpe M, Hagan RO, Kamat S, Gulamali FF, Xie H, Harris J, Patel M, Argueta K, Batchelor C, Nie K, Dellepiane S, Scott L, Levin MA, He JC, Suarez-Farinas M, Coca SG, Chan L, Azeloglu EU, Schadt E, Beckmann N, Gnjatic S, Merad M, Kim-Schulze S, Richards B, Glicksberg BS, Charney AW, Nadkarni GN. Paranjpe I, et al. Among authors: batchelor c. Commun Med (Lond). 2023 Jun 12;3(1):81. doi: 10.1038/s43856-023-00307-8. Commun Med (Lond). 2023. PMID: 37308534 Free PMC article.
48 results