Kapranov P - Search Results

1

Single-step capture and sequencing of natural DNA for detection of BRCA1 mutations.

Thompson JF, Reifenberger JG, Giladi E, Kerouac K, Gill J, Hansen E, Kahvejian A, Kapranov P, Knope T, Lipson D, Steinmann KE, Milos PM. Thompson JF, et al. Among authors: kapranov p. Genome Res. 2012 Feb;22(2):340-5. doi: 10.1101/gr.122192.111. Epub 2011 Jul 15. Genome Res. 2012. PMID: 21765009 Free PMC article.

2

Evidence for Existence of Multiple Functional Human Small RNAs Derived from Transcripts of Protein-Coding Genes.

Gao F, Wang F, Cao H, Chen Y, Diao Y, Kapranov P. Gao F, et al. Among authors: kapranov p. Int J Mol Sci. 2023 Feb 19;24(4):4163. doi: 10.3390/ijms24044163. Int J Mol Sci. 2023. PMID: 36835575 Free PMC article.

3

Dynamic Patterns of Mammalian Mitochondrial DNA Replication Uncovered Using SSiNGLe-5'ES.

Xu D, Luo L, Huang Y, Lu M, Tang L, Diao Y, Kapranov P. Xu D, et al. Among authors: kapranov p. Int J Mol Sci. 2023 Jun 3;24(11):9711. doi: 10.3390/ijms24119711. Int J Mol Sci. 2023. PMID: 37298662 Free PMC article.

4

New class of gene-termini-associated human RNAs suggests a novel RNA copying mechanism.

Kapranov P, Ozsolak F, Kim SW, Foissac S, Lipson D, Hart C, Roels S, Borel C, Antonarakis SE, Monaghan AP, John B, Milos PM. Kapranov P, et al. Nature. 2010 Jul 29;466(7306):642-6. doi: 10.1038/nature09190. Nature. 2010. PMID: 20671709 Free PMC article.

5

Error tolerant indexing and alignment of short reads with covering template families.

Giladi E, Healy J, Myers G, Hart C, Kapranov P, Lipson D, Roels S, Thayer E, Letovsky S. Giladi E, et al. Among authors: kapranov p. J Comput Biol. 2010 Oct;17(10):1397-1411. doi: 10.1089/cmb.2010.0005. J Comput Biol. 2010. PMID: 20937014

6

Comprehensive polyadenylation site maps in yeast and human reveal pervasive alternative polyadenylation.

Ozsolak F, Kapranov P, Foissac S, Kim SW, Fishilevich E, Monaghan AP, John B, Milos PM. Ozsolak F, et al. Among authors: kapranov p. Cell. 2010 Dec 10;143(6):1018-29. doi: 10.1016/j.cell.2010.11.020. Cell. 2010. PMID: 21145465 Free PMC article.

7

The majority of total nuclear-encoded non-ribosomal RNA in a human cell is 'dark matter' un-annotated RNA.

Kapranov P, St Laurent G, Raz T, Ozsolak F, Reynolds CP, Sorensen PH, Reaman G, Milos P, Arceci RJ, Thompson JF, Triche TJ. Kapranov P, et al. BMC Biol. 2010 Dec 21;8:149. doi: 10.1186/1741-7007-8-149. BMC Biol. 2010. PMID: 21176148 Free PMC article.

8

Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells.

Pastor WA, Pape UJ, Huang Y, Henderson HR, Lister R, Ko M, McLoughlin EM, Brudno Y, Mahapatra S, Kapranov P, Tahiliani M, Daley GQ, Liu XS, Ecker JR, Milos PM, Agarwal S, Rao A. Pastor WA, et al. Among authors: kapranov p. Nature. 2011 May 19;473(7347):394-7. doi: 10.1038/nature10102. Epub 2011 May 8. Nature. 2011. PMID: 21552279 Free PMC article.

9

Protocol dependence of sequencing-based gene expression measurements.

Raz T, Kapranov P, Lipson D, Letovsky S, Milos PM, Thompson JF. Raz T, et al. Among authors: kapranov p. PLoS One. 2011 May 6;6(5):e19287. doi: 10.1371/journal.pone.0019287. PLoS One. 2011. PMID: 21573114 Free PMC article.

10

True single-molecule DNA sequencing of a pleistocene horse bone.

Orlando L, Ginolhac A, Raghavan M, Vilstrup J, Rasmussen M, Magnussen K, Steinmann KE, Kapranov P, Thompson JF, Zazula G, Froese D, Moltke I, Shapiro B, Hofreiter M, Al-Rasheid KA, Gilbert MT, Willerslev E. Orlando L, et al. Among authors: kapranov p. Genome Res. 2011 Oct;21(10):1705-19. doi: 10.1101/gr.122747.111. Epub 2011 Jul 29. Genome Res. 2011. PMID: 21803858 Free PMC article.

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