Kilpinen SK - Search Results

1

LGI2 truncation causes a remitting focal epilepsy in dogs.

Seppälä EH, Jokinen TS, Fukata M, Fukata Y, Webster MT, Karlsson EK, Kilpinen SK, Steffen F, Dietschi E, Leeb T, Eklund R, Zhao X, Rilstone JJ, Lindblad-Toh K, Minassian BA, Lohi H. Seppälä EH, et al. Among authors: kilpinen sk. PLoS Genet. 2011 Jul;7(7):e1002194. doi: 10.1371/journal.pgen.1002194. Epub 2011 Jul 28. PLoS Genet. 2011. PMID: 21829378 Free PMC article.

2

Aberrant RNA splicing in cancer; expression changes and driver mutations of splicing factor genes.

Sveen A, Kilpinen S, Ruusulehto A, Lothe RA, Skotheim RI. Sveen A, et al. Oncogene. 2016 May 12;35(19):2413-27. doi: 10.1038/onc.2015.318. Epub 2015 Aug 24. Oncogene. 2016. PMID: 26300000 Review.

3

Application of active and kinase-deficient kinome collection for identification of kinases regulating hedgehog signaling.

Varjosalo M, Björklund M, Cheng F, Syvänen H, Kivioja T, Kilpinen S, Sun Z, Kallioniemi O, Stunnenberg HG, He WW, Ojala P, Taipale J. Varjosalo M, et al. Cell. 2008 May 2;133(3):537-48. doi: 10.1016/j.cell.2008.02.047. Cell. 2008. PMID: 18455992 Free article.

4

Biclustering methods: biological relevance and application in gene expression analysis.

Oghabian A, Kilpinen S, Hautaniemi S, Czeizler E. Oghabian A, et al. PLoS One. 2014 Mar 20;9(3):e90801. doi: 10.1371/journal.pone.0090801. eCollection 2014. PLoS One. 2014. PMID: 24651574 Free PMC article.

5

Gata2, Nkx2-2 and Skor2 form a transcription factor network regulating development of a midbrain GABAergic neuron subtype with characteristics of REM-sleep regulatory neurons.

Kirjavainen A, Singh P, Lahti L, Seja P, Lelkes Z, Makkonen A, Kilpinen S, Ono Y, Salminen M, Aitta-Aho T, Stenberg T, Molchanova S, Achim K, Partanen J. Kirjavainen A, et al. Development. 2022 Jul 15;149(14):dev200937. doi: 10.1242/dev.200937. Epub 2022 Jul 25. Development. 2022. PMID: 35815619

6

Gene expression changes associated with the anti-angiogenic activity of kallikrein-related peptidase 3 (KLK3) on human umbilical vein endothelial cells.

Mattsson JM, Laakkonen P, Kilpinen S, Stenman UH, Koistinen H. Mattsson JM, et al. Biol Chem. 2008 Jun;389(6):765-71. doi: 10.1515/BC.2008.088. Biol Chem. 2008. PMID: 18627292

7

Analysis of kinase gene expression patterns across 5681 human tissue samples reveals functional genomic taxonomy of the kinome.

Kilpinen S, Ojala K, Kallioniemi O. Kilpinen S, et al. PLoS One. 2010 Dec 3;5(12):e15068. doi: 10.1371/journal.pone.0015068. PLoS One. 2010. PMID: 21151926 Free PMC article.

8

GTI: a novel algorithm for identifying outlier gene expression profiles from integrated microarray datasets.

Mpindi JP, Sara H, Haapa-Paananen S, Kilpinen S, Pisto T, Bucher E, Ojala K, Iljin K, Vainio P, Björkman M, Gupta S, Kohonen P, Nees M, Kallioniemi O. Mpindi JP, et al. PLoS One. 2011 Feb 18;6(2):e17259. doi: 10.1371/journal.pone.0017259. PLoS One. 2011. PMID: 21365010 Free PMC article.

9

TMPRSS2 fusions with oncogenic ETS factors in prostate cancer involve unbalanced genomic rearrangements and are associated with HDAC1 and epigenetic reprogramming.

Iljin K, Wolf M, Edgren H, Gupta S, Kilpinen S, Skotheim RI, Peltola M, Smit F, Verhaegh G, Schalken J, Nees M, Kallioniemi O. Iljin K, et al. Cancer Res. 2006 Nov 1;66(21):10242-6. doi: 10.1158/0008-5472.CAN-06-1986. Cancer Res. 2006. PMID: 17079440 Free article.

10

Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues.

Kilpinen S, Autio R, Ojala K, Iljin K, Bucher E, Sara H, Pisto T, Saarela M, Skotheim RI, Björkman M, Mpindi JP, Haapa-Paananen S, Vainio P, Edgren H, Wolf M, Astola J, Nees M, Hautaniemi S, Kallioniemi O. Kilpinen S, et al. Genome Biol. 2008;9(9):R139. doi: 10.1186/gb-2008-9-9-r139. Epub 2008 Sep 19. Genome Biol. 2008. PMID: 18803840 Free PMC article.

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